The complete chloroplast genome of an endangered species Cymbidium mastersii (Orchidaceae)

Cymbidium mastersii Griff. & Lindl. is an endangered orchid. In this study, we report the complete chloroplast (cp) genome sequence and the cp genome features of C. mastersii. The cp genome sequence of C. mastersii was 155,362 bp in length. It included one large single-copy region (LSC, 84,465 b...

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Autores principales: Zheng, Fang, Pan, Yun-Yun, Li, Ting-Zhang, Chen, Gui-Zhen, Wu, Xin-Yi, Li, Li-Qiang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706812/
https://www.ncbi.nlm.nih.gov/pubmed/33365859
http://dx.doi.org/10.1080/23802359.2019.1666047
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author Zheng, Fang
Pan, Yun-Yun
Li, Ting-Zhang
Chen, Gui-Zhen
Wu, Xin-Yi
Li, Li-Qiang
author_facet Zheng, Fang
Pan, Yun-Yun
Li, Ting-Zhang
Chen, Gui-Zhen
Wu, Xin-Yi
Li, Li-Qiang
author_sort Zheng, Fang
collection PubMed
description Cymbidium mastersii Griff. & Lindl. is an endangered orchid. In this study, we report the complete chloroplast (cp) genome sequence and the cp genome features of C. mastersii. The cp genome sequence of C. mastersii was 155,362 bp in length. It included one large single-copy region (LSC, 84,465 bp), one small single-copy region (SSC, 20,647 bp), and two inverted repeat regions (IRs, 25,125 bp). The cp genome encoded 130 genes, of which 107 were unique genes (80 protein-coding genes, 23 tRNAs, and 4 rRNAs). The maximum-likelihood phylogenetic analysis showed that C. mastersii was a sister of C. erythraeum and C. nanulum.
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spelling pubmed-77068122020-12-22 The complete chloroplast genome of an endangered species Cymbidium mastersii (Orchidaceae) Zheng, Fang Pan, Yun-Yun Li, Ting-Zhang Chen, Gui-Zhen Wu, Xin-Yi Li, Li-Qiang Mitochondrial DNA B Resour Mitogenome Announcement Cymbidium mastersii Griff. & Lindl. is an endangered orchid. In this study, we report the complete chloroplast (cp) genome sequence and the cp genome features of C. mastersii. The cp genome sequence of C. mastersii was 155,362 bp in length. It included one large single-copy region (LSC, 84,465 bp), one small single-copy region (SSC, 20,647 bp), and two inverted repeat regions (IRs, 25,125 bp). The cp genome encoded 130 genes, of which 107 were unique genes (80 protein-coding genes, 23 tRNAs, and 4 rRNAs). The maximum-likelihood phylogenetic analysis showed that C. mastersii was a sister of C. erythraeum and C. nanulum. Taylor & Francis 2019-09-19 /pmc/articles/PMC7706812/ /pubmed/33365859 http://dx.doi.org/10.1080/23802359.2019.1666047 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Zheng, Fang
Pan, Yun-Yun
Li, Ting-Zhang
Chen, Gui-Zhen
Wu, Xin-Yi
Li, Li-Qiang
The complete chloroplast genome of an endangered species Cymbidium mastersii (Orchidaceae)
title The complete chloroplast genome of an endangered species Cymbidium mastersii (Orchidaceae)
title_full The complete chloroplast genome of an endangered species Cymbidium mastersii (Orchidaceae)
title_fullStr The complete chloroplast genome of an endangered species Cymbidium mastersii (Orchidaceae)
title_full_unstemmed The complete chloroplast genome of an endangered species Cymbidium mastersii (Orchidaceae)
title_short The complete chloroplast genome of an endangered species Cymbidium mastersii (Orchidaceae)
title_sort complete chloroplast genome of an endangered species cymbidium mastersii (orchidaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706812/
https://www.ncbi.nlm.nih.gov/pubmed/33365859
http://dx.doi.org/10.1080/23802359.2019.1666047
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