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Complete plastome sequence of Magnolia omeiensis (W.C. Cheng) Dandy (Magnoliaceae)

Magnolia omeiensis is an evergreen tree with 25 meters heights. It is distributed in tropical 1200–1300 m. Mount Emei. And it has been ranked as a CR (Critically Endangered) species in China. Here, we report and characterize the complete plastome of M. omeiensis in an effort to provide genomic resou...

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Autores principales: Wang, Guo-Qing, Zhang, Xiao-Feng, Wang, Hong-Xin, Zhu, Zhi-Xin, Wang, Hua-Feng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706837/
https://www.ncbi.nlm.nih.gov/pubmed/33365743
http://dx.doi.org/10.1080/23802359.2019.1660596
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author Wang, Guo-Qing
Zhang, Xiao-Feng
Wang, Hong-Xin
Zhu, Zhi-Xin
Wang, Hua-Feng
author_facet Wang, Guo-Qing
Zhang, Xiao-Feng
Wang, Hong-Xin
Zhu, Zhi-Xin
Wang, Hua-Feng
author_sort Wang, Guo-Qing
collection PubMed
description Magnolia omeiensis is an evergreen tree with 25 meters heights. It is distributed in tropical 1200–1300 m. Mount Emei. And it has been ranked as a CR (Critically Endangered) species in China. Here, we report and characterize the complete plastome of M. omeiensis in an effort to provide genomic resources useful for promoting its systematics research. The plastome of M. omeiensis is found to possess a total length 160,021 bp with the typical quadripartite structure of angiosperms, contains two Inverted Repeats (IRs) of 26,336 bp, a Large Single-Copy (LSC) region of 88,061 bp and a Small Single-Copy (SSC) region of 19,288 bp. The plastome contains 114 genes, consisting of 80 unique protein-coding genes, 30 unique tRNA genes and 4 unique rRNA genes. The overall A/T content in the plastome of M. omeiensis is 60.70%. The phylogenetic analysis indicated that M. omeiensis is close to Magnolia yunnanensis within Magnoliaceae in this study. The complete plastome sequence of M. omeiensis will provide a useful resource for the conservation genetics of this species as well as for the phylogenetic studies of Magnoliaceae.
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spelling pubmed-77068372020-12-22 Complete plastome sequence of Magnolia omeiensis (W.C. Cheng) Dandy (Magnoliaceae) Wang, Guo-Qing Zhang, Xiao-Feng Wang, Hong-Xin Zhu, Zhi-Xin Wang, Hua-Feng Mitochondrial DNA B Resour Mitogenome Announcement Magnolia omeiensis is an evergreen tree with 25 meters heights. It is distributed in tropical 1200–1300 m. Mount Emei. And it has been ranked as a CR (Critically Endangered) species in China. Here, we report and characterize the complete plastome of M. omeiensis in an effort to provide genomic resources useful for promoting its systematics research. The plastome of M. omeiensis is found to possess a total length 160,021 bp with the typical quadripartite structure of angiosperms, contains two Inverted Repeats (IRs) of 26,336 bp, a Large Single-Copy (LSC) region of 88,061 bp and a Small Single-Copy (SSC) region of 19,288 bp. The plastome contains 114 genes, consisting of 80 unique protein-coding genes, 30 unique tRNA genes and 4 unique rRNA genes. The overall A/T content in the plastome of M. omeiensis is 60.70%. The phylogenetic analysis indicated that M. omeiensis is close to Magnolia yunnanensis within Magnoliaceae in this study. The complete plastome sequence of M. omeiensis will provide a useful resource for the conservation genetics of this species as well as for the phylogenetic studies of Magnoliaceae. Taylor & Francis 2019-09-02 /pmc/articles/PMC7706837/ /pubmed/33365743 http://dx.doi.org/10.1080/23802359.2019.1660596 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Wang, Guo-Qing
Zhang, Xiao-Feng
Wang, Hong-Xin
Zhu, Zhi-Xin
Wang, Hua-Feng
Complete plastome sequence of Magnolia omeiensis (W.C. Cheng) Dandy (Magnoliaceae)
title Complete plastome sequence of Magnolia omeiensis (W.C. Cheng) Dandy (Magnoliaceae)
title_full Complete plastome sequence of Magnolia omeiensis (W.C. Cheng) Dandy (Magnoliaceae)
title_fullStr Complete plastome sequence of Magnolia omeiensis (W.C. Cheng) Dandy (Magnoliaceae)
title_full_unstemmed Complete plastome sequence of Magnolia omeiensis (W.C. Cheng) Dandy (Magnoliaceae)
title_short Complete plastome sequence of Magnolia omeiensis (W.C. Cheng) Dandy (Magnoliaceae)
title_sort complete plastome sequence of magnolia omeiensis (w.c. cheng) dandy (magnoliaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706837/
https://www.ncbi.nlm.nih.gov/pubmed/33365743
http://dx.doi.org/10.1080/23802359.2019.1660596
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