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Characterization of the complete chloroplast genome of Scutellaria amoena C. H. Wright (Lamiaceae), a medicinal plant in southwest China
Scutellaria amoena is a frequently-used medicinal plant in Southwerst China. In this study, we sequenced the complete chloroplast (cp) genome sequence of S. amoena C. H. Wright to investigate its phylogenetic relationship in the family Lamiaceae. The chloroplast genome of S. amoena was 151, 569 bp i...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706847/ https://www.ncbi.nlm.nih.gov/pubmed/33365854 http://dx.doi.org/10.1080/23802359.2019.1666677 |
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author | Chen, Qi Zhang, Dequan |
author_facet | Chen, Qi Zhang, Dequan |
author_sort | Chen, Qi |
collection | PubMed |
description | Scutellaria amoena is a frequently-used medicinal plant in Southwerst China. In this study, we sequenced the complete chloroplast (cp) genome sequence of S. amoena C. H. Wright to investigate its phylogenetic relationship in the family Lamiaceae. The chloroplast genome of S. amoena was 151, 569 bp in length with 38.4% overall GC content, including a large single copy (LSC) region of 83,739 bp, a small single copy (SSC) region of 17,326 bp and a pair of inverted repeats (IRs) of 25,252 bp. The cp genome contained 112 genes, including 79 protein-coding genes, 29 tRNA genes, and 4 rRNA genes. The phylogenetic analysis indicated S. amoena was closely related to S. baicalensis that is used as original species of Scutellariae Radix. |
format | Online Article Text |
id | pubmed-7706847 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77068472020-12-22 Characterization of the complete chloroplast genome of Scutellaria amoena C. H. Wright (Lamiaceae), a medicinal plant in southwest China Chen, Qi Zhang, Dequan Mitochondrial DNA B Resour Mitogenome Announcement Scutellaria amoena is a frequently-used medicinal plant in Southwerst China. In this study, we sequenced the complete chloroplast (cp) genome sequence of S. amoena C. H. Wright to investigate its phylogenetic relationship in the family Lamiaceae. The chloroplast genome of S. amoena was 151, 569 bp in length with 38.4% overall GC content, including a large single copy (LSC) region of 83,739 bp, a small single copy (SSC) region of 17,326 bp and a pair of inverted repeats (IRs) of 25,252 bp. The cp genome contained 112 genes, including 79 protein-coding genes, 29 tRNA genes, and 4 rRNA genes. The phylogenetic analysis indicated S. amoena was closely related to S. baicalensis that is used as original species of Scutellariae Radix. Taylor & Francis 2019-09-18 /pmc/articles/PMC7706847/ /pubmed/33365854 http://dx.doi.org/10.1080/23802359.2019.1666677 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Chen, Qi Zhang, Dequan Characterization of the complete chloroplast genome of Scutellaria amoena C. H. Wright (Lamiaceae), a medicinal plant in southwest China |
title | Characterization of the complete chloroplast genome of Scutellaria amoena C. H. Wright (Lamiaceae), a medicinal plant in southwest China |
title_full | Characterization of the complete chloroplast genome of Scutellaria amoena C. H. Wright (Lamiaceae), a medicinal plant in southwest China |
title_fullStr | Characterization of the complete chloroplast genome of Scutellaria amoena C. H. Wright (Lamiaceae), a medicinal plant in southwest China |
title_full_unstemmed | Characterization of the complete chloroplast genome of Scutellaria amoena C. H. Wright (Lamiaceae), a medicinal plant in southwest China |
title_short | Characterization of the complete chloroplast genome of Scutellaria amoena C. H. Wright (Lamiaceae), a medicinal plant in southwest China |
title_sort | characterization of the complete chloroplast genome of scutellaria amoena c. h. wright (lamiaceae), a medicinal plant in southwest china |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706847/ https://www.ncbi.nlm.nih.gov/pubmed/33365854 http://dx.doi.org/10.1080/23802359.2019.1666677 |
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