The complete nucleotide sequence of chloroplast genome of Gentiana apiata (Gentianaceae), an endemic medicinal herb in China

Gentiana apiata N. E. Brown (Gentianaceae) is a perennial herb plant and only grows in Qinba Mountains in China. Here, we first characterized the complete nucleotide sequence of chloroplast (cp) genome of G. apiata via Illumina next generation sequencing platform. The complete chloroplast genome of...

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Autores principales: Huang, Cai-Xia, Liu, Mi-Li, Zhang, Heng-Jia, Chang, Lei, Wang, Yu-Cai, Yan, Ji-Xuan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706864/
https://www.ncbi.nlm.nih.gov/pubmed/33365641
http://dx.doi.org/10.1080/23802359.2019.1641442
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author Huang, Cai-Xia
Liu, Mi-Li
Zhang, Heng-Jia
Chang, Lei
Wang, Yu-Cai
Yan, Ji-Xuan
author_facet Huang, Cai-Xia
Liu, Mi-Li
Zhang, Heng-Jia
Chang, Lei
Wang, Yu-Cai
Yan, Ji-Xuan
author_sort Huang, Cai-Xia
collection PubMed
description Gentiana apiata N. E. Brown (Gentianaceae) is a perennial herb plant and only grows in Qinba Mountains in China. Here, we first characterized the complete nucleotide sequence of chloroplast (cp) genome of G. apiata via Illumina next generation sequencing platform. The complete chloroplast genome of G. apiata was 144,274 bp in length, comprising of a large single copy (LSC) region of 77,353 bp, a small single copy (SSC) region of 17,009 bp, and two inverted repeat regions (IRs) of 24,956 bp. The cp genome contains 127 genes, including 82 protein-coding genes, 35 tRNA, eight rRNA genes, and two pseudogenes. Phylogenetic analysis based on 18 cp genome sequences showed that G. apiata closely related to congeneric species.
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spelling pubmed-77068642020-12-22 The complete nucleotide sequence of chloroplast genome of Gentiana apiata (Gentianaceae), an endemic medicinal herb in China Huang, Cai-Xia Liu, Mi-Li Zhang, Heng-Jia Chang, Lei Wang, Yu-Cai Yan, Ji-Xuan Mitochondrial DNA B Resour Mitogenome Announcement Gentiana apiata N. E. Brown (Gentianaceae) is a perennial herb plant and only grows in Qinba Mountains in China. Here, we first characterized the complete nucleotide sequence of chloroplast (cp) genome of G. apiata via Illumina next generation sequencing platform. The complete chloroplast genome of G. apiata was 144,274 bp in length, comprising of a large single copy (LSC) region of 77,353 bp, a small single copy (SSC) region of 17,009 bp, and two inverted repeat regions (IRs) of 24,956 bp. The cp genome contains 127 genes, including 82 protein-coding genes, 35 tRNA, eight rRNA genes, and two pseudogenes. Phylogenetic analysis based on 18 cp genome sequences showed that G. apiata closely related to congeneric species. Taylor & Francis 2019-07-16 /pmc/articles/PMC7706864/ /pubmed/33365641 http://dx.doi.org/10.1080/23802359.2019.1641442 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Huang, Cai-Xia
Liu, Mi-Li
Zhang, Heng-Jia
Chang, Lei
Wang, Yu-Cai
Yan, Ji-Xuan
The complete nucleotide sequence of chloroplast genome of Gentiana apiata (Gentianaceae), an endemic medicinal herb in China
title The complete nucleotide sequence of chloroplast genome of Gentiana apiata (Gentianaceae), an endemic medicinal herb in China
title_full The complete nucleotide sequence of chloroplast genome of Gentiana apiata (Gentianaceae), an endemic medicinal herb in China
title_fullStr The complete nucleotide sequence of chloroplast genome of Gentiana apiata (Gentianaceae), an endemic medicinal herb in China
title_full_unstemmed The complete nucleotide sequence of chloroplast genome of Gentiana apiata (Gentianaceae), an endemic medicinal herb in China
title_short The complete nucleotide sequence of chloroplast genome of Gentiana apiata (Gentianaceae), an endemic medicinal herb in China
title_sort complete nucleotide sequence of chloroplast genome of gentiana apiata (gentianaceae), an endemic medicinal herb in china
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706864/
https://www.ncbi.nlm.nih.gov/pubmed/33365641
http://dx.doi.org/10.1080/23802359.2019.1641442
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