Characterization of the complete chloroplast genome sequence of the giant knotweed, Fallopia sachalinensis from the volcanic island Dokdo, Republic of Korea

The giant knotweed plant, Fallopia sachalinensis is confined to Ulleung and Dokdo islands, Korea. Here, we reported the complete chloroplast genome of F. sachalinensis. The chloroplast genome size was 163,485 bp in length, containing a couple of identical inverted repeat regions of 31,108 bp, a larg...

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Autores principales: Raman, Gurusamy, Park, Kye Tae, Nam, Gi Heum, Kwak, Myounghai, Park, SeonJoo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706866/
https://www.ncbi.nlm.nih.gov/pubmed/33365815
http://dx.doi.org/10.1080/23802359.2019.1663769
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author Raman, Gurusamy
Park, Kye Tae
Nam, Gi Heum
Kwak, Myounghai
Park, SeonJoo
author_facet Raman, Gurusamy
Park, Kye Tae
Nam, Gi Heum
Kwak, Myounghai
Park, SeonJoo
author_sort Raman, Gurusamy
collection PubMed
description The giant knotweed plant, Fallopia sachalinensis is confined to Ulleung and Dokdo islands, Korea. Here, we reported the complete chloroplast genome of F. sachalinensis. The chloroplast genome size was 163,485 bp in length, containing a couple of identical inverted repeat regions of 31,108 bp, a large single-copy region of 87,703 bp and small single-copy region of 13,566 bp. The genome encoded 129 genes, of which 112 were unique, including 78 protein-coding, 30 tRNA and 4 rRNA genes. The maximum-likelihood phylogenetic tree showed that F. sachalinensis is a basal group and sister to the rest of the Polygonaceae family plants.
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spelling pubmed-77068662020-12-22 Characterization of the complete chloroplast genome sequence of the giant knotweed, Fallopia sachalinensis from the volcanic island Dokdo, Republic of Korea Raman, Gurusamy Park, Kye Tae Nam, Gi Heum Kwak, Myounghai Park, SeonJoo Mitochondrial DNA B Resour Mitogenome Announcement The giant knotweed plant, Fallopia sachalinensis is confined to Ulleung and Dokdo islands, Korea. Here, we reported the complete chloroplast genome of F. sachalinensis. The chloroplast genome size was 163,485 bp in length, containing a couple of identical inverted repeat regions of 31,108 bp, a large single-copy region of 87,703 bp and small single-copy region of 13,566 bp. The genome encoded 129 genes, of which 112 were unique, including 78 protein-coding, 30 tRNA and 4 rRNA genes. The maximum-likelihood phylogenetic tree showed that F. sachalinensis is a basal group and sister to the rest of the Polygonaceae family plants. Taylor & Francis 2019-09-12 /pmc/articles/PMC7706866/ /pubmed/33365815 http://dx.doi.org/10.1080/23802359.2019.1663769 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Raman, Gurusamy
Park, Kye Tae
Nam, Gi Heum
Kwak, Myounghai
Park, SeonJoo
Characterization of the complete chloroplast genome sequence of the giant knotweed, Fallopia sachalinensis from the volcanic island Dokdo, Republic of Korea
title Characterization of the complete chloroplast genome sequence of the giant knotweed, Fallopia sachalinensis from the volcanic island Dokdo, Republic of Korea
title_full Characterization of the complete chloroplast genome sequence of the giant knotweed, Fallopia sachalinensis from the volcanic island Dokdo, Republic of Korea
title_fullStr Characterization of the complete chloroplast genome sequence of the giant knotweed, Fallopia sachalinensis from the volcanic island Dokdo, Republic of Korea
title_full_unstemmed Characterization of the complete chloroplast genome sequence of the giant knotweed, Fallopia sachalinensis from the volcanic island Dokdo, Republic of Korea
title_short Characterization of the complete chloroplast genome sequence of the giant knotweed, Fallopia sachalinensis from the volcanic island Dokdo, Republic of Korea
title_sort characterization of the complete chloroplast genome sequence of the giant knotweed, fallopia sachalinensis from the volcanic island dokdo, republic of korea
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706866/
https://www.ncbi.nlm.nih.gov/pubmed/33365815
http://dx.doi.org/10.1080/23802359.2019.1663769
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