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The complete chloroplast genome of Rungia pectinata (Acanthaceae)
Rungia pectinata is an important traditional Chinese herbal medicine from the family Acanthaceae. The complete chloroplast genome (cp genome) of the genus Rungia was sequenced for the first time. The cp genome of R. pectinata was 149,627 bp in length. It was consisted of a large single copy (LSC) re...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706882/ https://www.ncbi.nlm.nih.gov/pubmed/33365706 http://dx.doi.org/10.1080/23802359.2019.1644216 |
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author | Lin, Zheli Huang, Sunan Deng, Yunfei |
author_facet | Lin, Zheli Huang, Sunan Deng, Yunfei |
author_sort | Lin, Zheli |
collection | PubMed |
description | Rungia pectinata is an important traditional Chinese herbal medicine from the family Acanthaceae. The complete chloroplast genome (cp genome) of the genus Rungia was sequenced for the first time. The cp genome of R. pectinata was 149,627 bp in length. It was consisted of a large single copy (LSC) region (81,976 bp) and a small single copy (SSC) region (16,626 bp), which were separated by two inverted repeats (IRs, 25,511 bp). This plastome contained 114 unique genes, including 80 protein-coding genes, 30 tRNA genes, and four rRNA genes. The overall GC content was 38.0%. Phylogenetic analysis of nine species in Acanthaceae was also conducted. This newly sequenced cp genome will be useful to further evolutionary studies, phylogenetic studies, and pharmacognostic identification in the genus Rungia. |
format | Online Article Text |
id | pubmed-7706882 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77068822020-12-22 The complete chloroplast genome of Rungia pectinata (Acanthaceae) Lin, Zheli Huang, Sunan Deng, Yunfei Mitochondrial DNA B Resour Mitogenome Announcement Rungia pectinata is an important traditional Chinese herbal medicine from the family Acanthaceae. The complete chloroplast genome (cp genome) of the genus Rungia was sequenced for the first time. The cp genome of R. pectinata was 149,627 bp in length. It was consisted of a large single copy (LSC) region (81,976 bp) and a small single copy (SSC) region (16,626 bp), which were separated by two inverted repeats (IRs, 25,511 bp). This plastome contained 114 unique genes, including 80 protein-coding genes, 30 tRNA genes, and four rRNA genes. The overall GC content was 38.0%. Phylogenetic analysis of nine species in Acanthaceae was also conducted. This newly sequenced cp genome will be useful to further evolutionary studies, phylogenetic studies, and pharmacognostic identification in the genus Rungia. Taylor & Francis 2019-07-22 /pmc/articles/PMC7706882/ /pubmed/33365706 http://dx.doi.org/10.1080/23802359.2019.1644216 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Lin, Zheli Huang, Sunan Deng, Yunfei The complete chloroplast genome of Rungia pectinata (Acanthaceae) |
title | The complete chloroplast genome of Rungia pectinata (Acanthaceae) |
title_full | The complete chloroplast genome of Rungia pectinata (Acanthaceae) |
title_fullStr | The complete chloroplast genome of Rungia pectinata (Acanthaceae) |
title_full_unstemmed | The complete chloroplast genome of Rungia pectinata (Acanthaceae) |
title_short | The complete chloroplast genome of Rungia pectinata (Acanthaceae) |
title_sort | complete chloroplast genome of rungia pectinata (acanthaceae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706882/ https://www.ncbi.nlm.nih.gov/pubmed/33365706 http://dx.doi.org/10.1080/23802359.2019.1644216 |
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