The complete chloroplast genome of Eichhornia crassipes (Pontederiaceae) and phylogeny of commelinids

Eichhornia crassipes is a floating aquatic plant native to the American tropics. Here we reported and characterized the first complete chloroplast (cp) genome of Eichhornia crassipes and analyzed the phylogenomic relationship of Commelinids based on complete chloroplast sequences. The complete chlor...

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Detalles Bibliográficos
Autores principales: Ma, Qing, Lu, Yin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706893/
https://www.ncbi.nlm.nih.gov/pubmed/33365911
http://dx.doi.org/10.1080/23802359.2019.1667901
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author Ma, Qing
Lu, Yin
author_facet Ma, Qing
Lu, Yin
author_sort Ma, Qing
collection PubMed
description Eichhornia crassipes is a floating aquatic plant native to the American tropics. Here we reported and characterized the first complete chloroplast (cp) genome of Eichhornia crassipes and analyzed the phylogenomic relationship of Commelinids based on complete chloroplast sequences. The complete chloroplast genome of Eichhornia crassipes has a typical quadripartite structure with a total length of 161,783 bp. A total of 124 genes, including 85 encoding genes, 38 transfer RNA genes, and 8 ribosomal RNA genes were annotated. The phylogenomic study validated the phylogenetic position of Eichhornia crassipes and showed that four species from Commelinales form a monophyletic group sister to Zingiberales.
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spelling pubmed-77068932020-12-22 The complete chloroplast genome of Eichhornia crassipes (Pontederiaceae) and phylogeny of commelinids Ma, Qing Lu, Yin Mitochondrial DNA B Resour Mitogenome Announcement Eichhornia crassipes is a floating aquatic plant native to the American tropics. Here we reported and characterized the first complete chloroplast (cp) genome of Eichhornia crassipes and analyzed the phylogenomic relationship of Commelinids based on complete chloroplast sequences. The complete chloroplast genome of Eichhornia crassipes has a typical quadripartite structure with a total length of 161,783 bp. A total of 124 genes, including 85 encoding genes, 38 transfer RNA genes, and 8 ribosomal RNA genes were annotated. The phylogenomic study validated the phylogenetic position of Eichhornia crassipes and showed that four species from Commelinales form a monophyletic group sister to Zingiberales. Taylor & Francis 2019-09-23 /pmc/articles/PMC7706893/ /pubmed/33365911 http://dx.doi.org/10.1080/23802359.2019.1667901 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Ma, Qing
Lu, Yin
The complete chloroplast genome of Eichhornia crassipes (Pontederiaceae) and phylogeny of commelinids
title The complete chloroplast genome of Eichhornia crassipes (Pontederiaceae) and phylogeny of commelinids
title_full The complete chloroplast genome of Eichhornia crassipes (Pontederiaceae) and phylogeny of commelinids
title_fullStr The complete chloroplast genome of Eichhornia crassipes (Pontederiaceae) and phylogeny of commelinids
title_full_unstemmed The complete chloroplast genome of Eichhornia crassipes (Pontederiaceae) and phylogeny of commelinids
title_short The complete chloroplast genome of Eichhornia crassipes (Pontederiaceae) and phylogeny of commelinids
title_sort complete chloroplast genome of eichhornia crassipes (pontederiaceae) and phylogeny of commelinids
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706893/
https://www.ncbi.nlm.nih.gov/pubmed/33365911
http://dx.doi.org/10.1080/23802359.2019.1667901
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