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Complete plastome sequence of Osmanthus armatus and phylogenetic implications in Oleaceae

Osmanthus armatus (Oleaceae) is mainly distributed in the southwest of China and also planted in arboretums as an ornamental plant. In the present study, the plastome of O. armatus was reconstructed using genome skimming sequencing, and the phylogeny analysis was inferred based on whole plastome dat...

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Autores principales: Du, Yingxue, Li, Rui, Zhang, Qingde
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706894/
https://www.ncbi.nlm.nih.gov/pubmed/33365865
http://dx.doi.org/10.1080/23802359.2019.1666686
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author Du, Yingxue
Li, Rui
Zhang, Qingde
author_facet Du, Yingxue
Li, Rui
Zhang, Qingde
author_sort Du, Yingxue
collection PubMed
description Osmanthus armatus (Oleaceae) is mainly distributed in the southwest of China and also planted in arboretums as an ornamental plant. In the present study, the plastome of O. armatus was reconstructed using genome skimming sequencing, and the phylogeny analysis was inferred based on whole plastome data. The plastome of O. armatus is 155,259 bp in length, comprising two copies of inverted regions (IR, 25,680 bp) separated by the large single copy (LSC, 86,534 bp) and small single copy (SSC, 17,365 bp) regions. The genome encodes 114 unique genes, including 80 different protein-coding genes, 30 tRNA genes, and four rRNA genes, with 20 duplicated genes in the IR regions. Phylogenetic analysis suggests that the representative species from Osmanthus is monophyletic, and O. armatus is sister to O. fragrans within this genus.
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spelling pubmed-77068942020-12-22 Complete plastome sequence of Osmanthus armatus and phylogenetic implications in Oleaceae Du, Yingxue Li, Rui Zhang, Qingde Mitochondrial DNA B Resour Mitogenome Announcement Osmanthus armatus (Oleaceae) is mainly distributed in the southwest of China and also planted in arboretums as an ornamental plant. In the present study, the plastome of O. armatus was reconstructed using genome skimming sequencing, and the phylogeny analysis was inferred based on whole plastome data. The plastome of O. armatus is 155,259 bp in length, comprising two copies of inverted regions (IR, 25,680 bp) separated by the large single copy (LSC, 86,534 bp) and small single copy (SSC, 17,365 bp) regions. The genome encodes 114 unique genes, including 80 different protein-coding genes, 30 tRNA genes, and four rRNA genes, with 20 duplicated genes in the IR regions. Phylogenetic analysis suggests that the representative species from Osmanthus is monophyletic, and O. armatus is sister to O. fragrans within this genus. Taylor & Francis 2019-09-19 /pmc/articles/PMC7706894/ /pubmed/33365865 http://dx.doi.org/10.1080/23802359.2019.1666686 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Du, Yingxue
Li, Rui
Zhang, Qingde
Complete plastome sequence of Osmanthus armatus and phylogenetic implications in Oleaceae
title Complete plastome sequence of Osmanthus armatus and phylogenetic implications in Oleaceae
title_full Complete plastome sequence of Osmanthus armatus and phylogenetic implications in Oleaceae
title_fullStr Complete plastome sequence of Osmanthus armatus and phylogenetic implications in Oleaceae
title_full_unstemmed Complete plastome sequence of Osmanthus armatus and phylogenetic implications in Oleaceae
title_short Complete plastome sequence of Osmanthus armatus and phylogenetic implications in Oleaceae
title_sort complete plastome sequence of osmanthus armatus and phylogenetic implications in oleaceae
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706894/
https://www.ncbi.nlm.nih.gov/pubmed/33365865
http://dx.doi.org/10.1080/23802359.2019.1666686
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