The complete chloroplast genome sequence of Zanthoxylum armatum

The first complete chloroplast genome sequences of Zanthoxylum armatum were reported in this study. The cpDNA of Z. armatum is 158,579 bp in length, contains a large single copy region (LSC) of 85,780 bp and a small single copy region (SSC) of 17,598 bp, which were separated by a pair of inverted re...

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Detalles Bibliográficos
Autores principales: Wang, Yi, Hao, Jiabo, Yuan, Xiaolong, Sima, Yongkang, Lu, Bin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706899/
https://www.ncbi.nlm.nih.gov/pubmed/33365605
http://dx.doi.org/10.1080/23802359.2019.1640088
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author Wang, Yi
Hao, Jiabo
Yuan, Xiaolong
Sima, Yongkang
Lu, Bin
author_facet Wang, Yi
Hao, Jiabo
Yuan, Xiaolong
Sima, Yongkang
Lu, Bin
author_sort Wang, Yi
collection PubMed
description The first complete chloroplast genome sequences of Zanthoxylum armatum were reported in this study. The cpDNA of Z. armatum is 158,579 bp in length, contains a large single copy region (LSC) of 85,780 bp and a small single copy region (SSC) of 17,598 bp, which were separated by a pair of inverted repeat (IR) regions of 27,598 bp. The genome contains 133 genes, including 88 protein-coding genes, 8 ribosomal RNA genes, and 37 transfer RNA genes. The overall GC content of the whole genome is 38.5%. Phylogenetic analysis of 18 chloroplast genomes within the family Rutaceae suggests that Z. armatum is closely related to Zanthoxylum schinifolium.
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spelling pubmed-77068992020-12-22 The complete chloroplast genome sequence of Zanthoxylum armatum Wang, Yi Hao, Jiabo Yuan, Xiaolong Sima, Yongkang Lu, Bin Mitochondrial DNA B Resour Mitogenome Announcement The first complete chloroplast genome sequences of Zanthoxylum armatum were reported in this study. The cpDNA of Z. armatum is 158,579 bp in length, contains a large single copy region (LSC) of 85,780 bp and a small single copy region (SSC) of 17,598 bp, which were separated by a pair of inverted repeat (IR) regions of 27,598 bp. The genome contains 133 genes, including 88 protein-coding genes, 8 ribosomal RNA genes, and 37 transfer RNA genes. The overall GC content of the whole genome is 38.5%. Phylogenetic analysis of 18 chloroplast genomes within the family Rutaceae suggests that Z. armatum is closely related to Zanthoxylum schinifolium. Taylor & Francis 2019-07-13 /pmc/articles/PMC7706899/ /pubmed/33365605 http://dx.doi.org/10.1080/23802359.2019.1640088 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Wang, Yi
Hao, Jiabo
Yuan, Xiaolong
Sima, Yongkang
Lu, Bin
The complete chloroplast genome sequence of Zanthoxylum armatum
title The complete chloroplast genome sequence of Zanthoxylum armatum
title_full The complete chloroplast genome sequence of Zanthoxylum armatum
title_fullStr The complete chloroplast genome sequence of Zanthoxylum armatum
title_full_unstemmed The complete chloroplast genome sequence of Zanthoxylum armatum
title_short The complete chloroplast genome sequence of Zanthoxylum armatum
title_sort complete chloroplast genome sequence of zanthoxylum armatum
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706899/
https://www.ncbi.nlm.nih.gov/pubmed/33365605
http://dx.doi.org/10.1080/23802359.2019.1640088
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