Characterization of the complete chloroplast genome of the Hongkong kumquat (Fortunella hindsii Swingle)

Hongkong qumquat (Fortunella hindsii Swingle) is a wild citrus species native to China. In this study, we firstly reporteded its complete chloroplast genome using BGISEQ-500 sequencing. The chloroplast genome is 160,145 bp in size, containing a large single copy region (87,467 bp), a small single co...

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Autores principales: Xu, Shi-Rong, Zhang, Yong-Yan, Liu, Fan, Tian, Na, Pan, Dong-Ming, Bei, Xue-Jun, Cheng, Chun-Zhen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706910/
https://www.ncbi.nlm.nih.gov/pubmed/33365649
http://dx.doi.org/10.1080/23802359.2019.1642166
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author Xu, Shi-Rong
Zhang, Yong-Yan
Liu, Fan
Tian, Na
Pan, Dong-Ming
Bei, Xue-Jun
Cheng, Chun-Zhen
author_facet Xu, Shi-Rong
Zhang, Yong-Yan
Liu, Fan
Tian, Na
Pan, Dong-Ming
Bei, Xue-Jun
Cheng, Chun-Zhen
author_sort Xu, Shi-Rong
collection PubMed
description Hongkong qumquat (Fortunella hindsii Swingle) is a wild citrus species native to China. In this study, we firstly reporteded its complete chloroplast genome using BGISEQ-500 sequencing. The chloroplast genome is 160,145 bp in size, containing a large single copy region (87,467 bp), a small single copy region (18,730 bp), and a pair of IR regions (26,974 bp). The chloroplast genome contains 112 unique genes, including 79 protein-coding genes, 29 tRNAs, and 4 rRNAs. Phylogenetic maximum-likelihood analysis indicated that F. hindsii is closely related to Citrus species. The complete chloroplast genome would be subsequently used for citrus species researches.
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spelling pubmed-77069102020-12-22 Characterization of the complete chloroplast genome of the Hongkong kumquat (Fortunella hindsii Swingle) Xu, Shi-Rong Zhang, Yong-Yan Liu, Fan Tian, Na Pan, Dong-Ming Bei, Xue-Jun Cheng, Chun-Zhen Mitochondrial DNA B Resour Mitogenome Announcement Hongkong qumquat (Fortunella hindsii Swingle) is a wild citrus species native to China. In this study, we firstly reporteded its complete chloroplast genome using BGISEQ-500 sequencing. The chloroplast genome is 160,145 bp in size, containing a large single copy region (87,467 bp), a small single copy region (18,730 bp), and a pair of IR regions (26,974 bp). The chloroplast genome contains 112 unique genes, including 79 protein-coding genes, 29 tRNAs, and 4 rRNAs. Phylogenetic maximum-likelihood analysis indicated that F. hindsii is closely related to Citrus species. The complete chloroplast genome would be subsequently used for citrus species researches. Taylor & Francis 2019-07-17 /pmc/articles/PMC7706910/ /pubmed/33365649 http://dx.doi.org/10.1080/23802359.2019.1642166 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Xu, Shi-Rong
Zhang, Yong-Yan
Liu, Fan
Tian, Na
Pan, Dong-Ming
Bei, Xue-Jun
Cheng, Chun-Zhen
Characterization of the complete chloroplast genome of the Hongkong kumquat (Fortunella hindsii Swingle)
title Characterization of the complete chloroplast genome of the Hongkong kumquat (Fortunella hindsii Swingle)
title_full Characterization of the complete chloroplast genome of the Hongkong kumquat (Fortunella hindsii Swingle)
title_fullStr Characterization of the complete chloroplast genome of the Hongkong kumquat (Fortunella hindsii Swingle)
title_full_unstemmed Characterization of the complete chloroplast genome of the Hongkong kumquat (Fortunella hindsii Swingle)
title_short Characterization of the complete chloroplast genome of the Hongkong kumquat (Fortunella hindsii Swingle)
title_sort characterization of the complete chloroplast genome of the hongkong kumquat (fortunella hindsii swingle)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706910/
https://www.ncbi.nlm.nih.gov/pubmed/33365649
http://dx.doi.org/10.1080/23802359.2019.1642166
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