The complete mitogenome of Smith’s shrew (Chodsigoa smithii)

The Smith’s shrew (Chodsigoa smithii) belongs to subfamily Soricinae, which is an endemic shrew to China. In this study, we obtained the complete mitochondrial genome of the C. smithii. This mitogenome is a circular molecule with 17,108 bp in length, containing 13 protein-coding genes, 22 transfer R...

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Autores principales: Pu, Yingting, Tan, Xuemei, Wei, Haixue, Fu, Changkun, Chen, Shunde
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706989/
https://www.ncbi.nlm.nih.gov/pubmed/33365623
http://dx.doi.org/10.1080/23802359.2019.1640645
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author Pu, Yingting
Tan, Xuemei
Wei, Haixue
Fu, Changkun
Chen, Shunde
author_facet Pu, Yingting
Tan, Xuemei
Wei, Haixue
Fu, Changkun
Chen, Shunde
author_sort Pu, Yingting
collection PubMed
description The Smith’s shrew (Chodsigoa smithii) belongs to subfamily Soricinae, which is an endemic shrew to China. In this study, we obtained the complete mitochondrial genome of the C. smithii. This mitogenome is a circular molecule with 17,108 bp in length, containing 13 protein-coding genes, 22 transfer RNA genes, two ribosome RNA genes, one light strand replication origin (OL), one non-coding region, and with a base composition of 32.5% A, 29.3% T, 24.8% C, and 13.4% G. The nucleotide sequence data of 13 protein-coding genes of C. smithii and other 19 Soricomorpha species were used for phylogenetic analyses. Phylogenetic tree shows that Soricinae includes two major phylogenetic lineages. Chodsigoa smithii is located as a basal position in tribe Nectogalini.
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spelling pubmed-77069892020-12-22 The complete mitogenome of Smith’s shrew (Chodsigoa smithii) Pu, Yingting Tan, Xuemei Wei, Haixue Fu, Changkun Chen, Shunde Mitochondrial DNA B Resour Mitogenome Announcement The Smith’s shrew (Chodsigoa smithii) belongs to subfamily Soricinae, which is an endemic shrew to China. In this study, we obtained the complete mitochondrial genome of the C. smithii. This mitogenome is a circular molecule with 17,108 bp in length, containing 13 protein-coding genes, 22 transfer RNA genes, two ribosome RNA genes, one light strand replication origin (OL), one non-coding region, and with a base composition of 32.5% A, 29.3% T, 24.8% C, and 13.4% G. The nucleotide sequence data of 13 protein-coding genes of C. smithii and other 19 Soricomorpha species were used for phylogenetic analyses. Phylogenetic tree shows that Soricinae includes two major phylogenetic lineages. Chodsigoa smithii is located as a basal position in tribe Nectogalini. Taylor & Francis 2019-07-18 /pmc/articles/PMC7706989/ /pubmed/33365623 http://dx.doi.org/10.1080/23802359.2019.1640645 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Pu, Yingting
Tan, Xuemei
Wei, Haixue
Fu, Changkun
Chen, Shunde
The complete mitogenome of Smith’s shrew (Chodsigoa smithii)
title The complete mitogenome of Smith’s shrew (Chodsigoa smithii)
title_full The complete mitogenome of Smith’s shrew (Chodsigoa smithii)
title_fullStr The complete mitogenome of Smith’s shrew (Chodsigoa smithii)
title_full_unstemmed The complete mitogenome of Smith’s shrew (Chodsigoa smithii)
title_short The complete mitogenome of Smith’s shrew (Chodsigoa smithii)
title_sort complete mitogenome of smith’s shrew (chodsigoa smithii)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706989/
https://www.ncbi.nlm.nih.gov/pubmed/33365623
http://dx.doi.org/10.1080/23802359.2019.1640645
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