The complete chloroplast genome of Pinus squamata (Pinaceae), a critically endangered species in China

The complete chloroplast (cp) genome of Pinus squamata, a critically endangered species in China, was reported in this study. The cp genome is 118,300 bp in length and has four regions: 65,298 bp of large single copy (LSC) region and 52,098 bp of small single copy (SSC) region separated by 452 bp of...

Descripción completa

Detalles Bibliográficos
Autores principales: Ling, Li-Zhen, Zhang, Shu-Dong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706991/
https://www.ncbi.nlm.nih.gov/pubmed/33365675
http://dx.doi.org/10.1080/23802359.2019.1644224
_version_ 1783617266907086848
author Ling, Li-Zhen
Zhang, Shu-Dong
author_facet Ling, Li-Zhen
Zhang, Shu-Dong
author_sort Ling, Li-Zhen
collection PubMed
description The complete chloroplast (cp) genome of Pinus squamata, a critically endangered species in China, was reported in this study. The cp genome is 118,300 bp in length and has four regions: 65,298 bp of large single copy (LSC) region and 52,098 bp of small single copy (SSC) region separated by 452 bp of highly reduced inverted repeat (IR) regions. This cp genome with GC content of 38.8% contains 107 unique genes (73 protein-coding genes, 30 tRNA genes, and four rRNA genes). Phylogenetic analysis based on the complete cp genomes indicates that P. squamata is closer to P. gerardiana than P. bungeana.
format Online
Article
Text
id pubmed-7706991
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-77069912020-12-22 The complete chloroplast genome of Pinus squamata (Pinaceae), a critically endangered species in China Ling, Li-Zhen Zhang, Shu-Dong Mitochondrial DNA B Resour Mitogenome Announcement The complete chloroplast (cp) genome of Pinus squamata, a critically endangered species in China, was reported in this study. The cp genome is 118,300 bp in length and has four regions: 65,298 bp of large single copy (LSC) region and 52,098 bp of small single copy (SSC) region separated by 452 bp of highly reduced inverted repeat (IR) regions. This cp genome with GC content of 38.8% contains 107 unique genes (73 protein-coding genes, 30 tRNA genes, and four rRNA genes). Phylogenetic analysis based on the complete cp genomes indicates that P. squamata is closer to P. gerardiana than P. bungeana. Taylor & Francis 2019-07-22 /pmc/articles/PMC7706991/ /pubmed/33365675 http://dx.doi.org/10.1080/23802359.2019.1644224 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Ling, Li-Zhen
Zhang, Shu-Dong
The complete chloroplast genome of Pinus squamata (Pinaceae), a critically endangered species in China
title The complete chloroplast genome of Pinus squamata (Pinaceae), a critically endangered species in China
title_full The complete chloroplast genome of Pinus squamata (Pinaceae), a critically endangered species in China
title_fullStr The complete chloroplast genome of Pinus squamata (Pinaceae), a critically endangered species in China
title_full_unstemmed The complete chloroplast genome of Pinus squamata (Pinaceae), a critically endangered species in China
title_short The complete chloroplast genome of Pinus squamata (Pinaceae), a critically endangered species in China
title_sort complete chloroplast genome of pinus squamata (pinaceae), a critically endangered species in china
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706991/
https://www.ncbi.nlm.nih.gov/pubmed/33365675
http://dx.doi.org/10.1080/23802359.2019.1644224
work_keys_str_mv AT linglizhen thecompletechloroplastgenomeofpinussquamatapinaceaeacriticallyendangeredspeciesinchina
AT zhangshudong thecompletechloroplastgenomeofpinussquamatapinaceaeacriticallyendangeredspeciesinchina
AT linglizhen completechloroplastgenomeofpinussquamatapinaceaeacriticallyendangeredspeciesinchina
AT zhangshudong completechloroplastgenomeofpinussquamatapinaceaeacriticallyendangeredspeciesinchina

Ejemplares similares