The complete chloroplast genome of new alien species, Celosia trigyna L. (Amaranthaceae), in China

The first complete chloroplast genome sequences of new alien weeds in Guangdong, Celosia, were reported in this study. The C. trigyna plastome was 152,089 bp long, with the large single copy (LSC) region of 83,716 bp, the small single copy (SSC) region of 17,251 bp, and two inverted repeat (IR) regi...

Descripción completa

Detalles Bibliográficos
Autores principales: Xu, Han, Jing, Xiaoyan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706995/
https://www.ncbi.nlm.nih.gov/pubmed/33365673
http://dx.doi.org/10.1080/23802359.2019.1643802
_version_ 1783617267841368064
author Xu, Han
Jing, Xiaoyan
author_facet Xu, Han
Jing, Xiaoyan
author_sort Xu, Han
collection PubMed
description The first complete chloroplast genome sequences of new alien weeds in Guangdong, Celosia, were reported in this study. The C. trigyna plastome was 152,089 bp long, with the large single copy (LSC) region of 83,716 bp, the small single copy (SSC) region of 17,251 bp, and two inverted repeat (IR) regions of 25,561 bp. The plastome contained 130 genes, including 85 proteincoding, eight ribosomal RNA, and 37 transfer RNA genes. The overall GC content was 36.9%. Phylogenetic analysis of 21 representative plastomes within the order Caryophyllales suggests that C. trigyna is closely related to the species in genus Amaranthus.
format Online
Article
Text
id pubmed-7706995
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-77069952020-12-22 The complete chloroplast genome of new alien species, Celosia trigyna L. (Amaranthaceae), in China Xu, Han Jing, Xiaoyan Mitochondrial DNA B Resour Mitogenome Announcement The first complete chloroplast genome sequences of new alien weeds in Guangdong, Celosia, were reported in this study. The C. trigyna plastome was 152,089 bp long, with the large single copy (LSC) region of 83,716 bp, the small single copy (SSC) region of 17,251 bp, and two inverted repeat (IR) regions of 25,561 bp. The plastome contained 130 genes, including 85 proteincoding, eight ribosomal RNA, and 37 transfer RNA genes. The overall GC content was 36.9%. Phylogenetic analysis of 21 representative plastomes within the order Caryophyllales suggests that C. trigyna is closely related to the species in genus Amaranthus. Taylor & Francis 2019-07-22 /pmc/articles/PMC7706995/ /pubmed/33365673 http://dx.doi.org/10.1080/23802359.2019.1643802 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Xu, Han
Jing, Xiaoyan
The complete chloroplast genome of new alien species, Celosia trigyna L. (Amaranthaceae), in China
title The complete chloroplast genome of new alien species, Celosia trigyna L. (Amaranthaceae), in China
title_full The complete chloroplast genome of new alien species, Celosia trigyna L. (Amaranthaceae), in China
title_fullStr The complete chloroplast genome of new alien species, Celosia trigyna L. (Amaranthaceae), in China
title_full_unstemmed The complete chloroplast genome of new alien species, Celosia trigyna L. (Amaranthaceae), in China
title_short The complete chloroplast genome of new alien species, Celosia trigyna L. (Amaranthaceae), in China
title_sort complete chloroplast genome of new alien species, celosia trigyna l. (amaranthaceae), in china
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706995/
https://www.ncbi.nlm.nih.gov/pubmed/33365673
http://dx.doi.org/10.1080/23802359.2019.1643802
work_keys_str_mv AT xuhan thecompletechloroplastgenomeofnewalienspeciescelosiatrigynalamaranthaceaeinchina
AT jingxiaoyan thecompletechloroplastgenomeofnewalienspeciescelosiatrigynalamaranthaceaeinchina
AT xuhan completechloroplastgenomeofnewalienspeciescelosiatrigynalamaranthaceaeinchina
AT jingxiaoyan completechloroplastgenomeofnewalienspeciescelosiatrigynalamaranthaceaeinchina

Ejemplares similares