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Complete plastome sequence of Rumex japonicus (Polygonaceae) in Dok-do Island, Korea

We reported the complete chloroplast genome sequence of Rumex japonicus in Dok-do Island, Korea. The genome size was 159,223 bp in total length with one large single-copy (LSC; 84,962 bp), one small single-copy (SSC; 12,999 bp), and 2 inverted repeat (IR) regions (IR(a) and IR(b), each with 30,631 b...

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Autores principales: Youn, Jin-Suk, Yang, JiYoung, Kim, Seung-Chul, Pak, Jae-Hong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706998/
https://www.ncbi.nlm.nih.gov/pubmed/33365778
http://dx.doi.org/10.1080/23802359.2019.1660274
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author Youn, Jin-Suk
Yang, JiYoung
Kim, Seung-Chul
Pak, Jae-Hong
author_facet Youn, Jin-Suk
Yang, JiYoung
Kim, Seung-Chul
Pak, Jae-Hong
author_sort Youn, Jin-Suk
collection PubMed
description We reported the complete chloroplast genome sequence of Rumex japonicus in Dok-do Island, Korea. The genome size was 159,223 bp in total length with one large single-copy (LSC; 84,962 bp), one small single-copy (SSC; 12,999 bp), and 2 inverted repeat (IR) regions (IR(a) and IR(b), each with 30,631 bp). The overall GC content was 37.5% and the genome contained 131 genes, including 83 protein-coding, 38 transfer RNA and 8 ribosomal RNA genes. Phylogenetic analysis supported monophyly of subgenus Rumex and determined the phylogenetic position of R. japonicus as sister to the clade containing R. crispus and R. nepalensis.
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spelling pubmed-77069982020-12-22 Complete plastome sequence of Rumex japonicus (Polygonaceae) in Dok-do Island, Korea Youn, Jin-Suk Yang, JiYoung Kim, Seung-Chul Pak, Jae-Hong Mitochondrial DNA B Resour Mitogenome Announcement We reported the complete chloroplast genome sequence of Rumex japonicus in Dok-do Island, Korea. The genome size was 159,223 bp in total length with one large single-copy (LSC; 84,962 bp), one small single-copy (SSC; 12,999 bp), and 2 inverted repeat (IR) regions (IR(a) and IR(b), each with 30,631 bp). The overall GC content was 37.5% and the genome contained 131 genes, including 83 protein-coding, 38 transfer RNA and 8 ribosomal RNA genes. Phylogenetic analysis supported monophyly of subgenus Rumex and determined the phylogenetic position of R. japonicus as sister to the clade containing R. crispus and R. nepalensis. Taylor & Francis 2019-09-03 /pmc/articles/PMC7706998/ /pubmed/33365778 http://dx.doi.org/10.1080/23802359.2019.1660274 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Youn, Jin-Suk
Yang, JiYoung
Kim, Seung-Chul
Pak, Jae-Hong
Complete plastome sequence of Rumex japonicus (Polygonaceae) in Dok-do Island, Korea
title Complete plastome sequence of Rumex japonicus (Polygonaceae) in Dok-do Island, Korea
title_full Complete plastome sequence of Rumex japonicus (Polygonaceae) in Dok-do Island, Korea
title_fullStr Complete plastome sequence of Rumex japonicus (Polygonaceae) in Dok-do Island, Korea
title_full_unstemmed Complete plastome sequence of Rumex japonicus (Polygonaceae) in Dok-do Island, Korea
title_short Complete plastome sequence of Rumex japonicus (Polygonaceae) in Dok-do Island, Korea
title_sort complete plastome sequence of rumex japonicus (polygonaceae) in dok-do island, korea
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706998/
https://www.ncbi.nlm.nih.gov/pubmed/33365778
http://dx.doi.org/10.1080/23802359.2019.1660274
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