Cargando…
Complete plastome sequence of Rumex japonicus (Polygonaceae) in Dok-do Island, Korea
We reported the complete chloroplast genome sequence of Rumex japonicus in Dok-do Island, Korea. The genome size was 159,223 bp in total length with one large single-copy (LSC; 84,962 bp), one small single-copy (SSC; 12,999 bp), and 2 inverted repeat (IR) regions (IR(a) and IR(b), each with 30,631 b...
Autores principales: | , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2019
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706998/ https://www.ncbi.nlm.nih.gov/pubmed/33365778 http://dx.doi.org/10.1080/23802359.2019.1660274 |
_version_ | 1783617268506165248 |
---|---|
author | Youn, Jin-Suk Yang, JiYoung Kim, Seung-Chul Pak, Jae-Hong |
author_facet | Youn, Jin-Suk Yang, JiYoung Kim, Seung-Chul Pak, Jae-Hong |
author_sort | Youn, Jin-Suk |
collection | PubMed |
description | We reported the complete chloroplast genome sequence of Rumex japonicus in Dok-do Island, Korea. The genome size was 159,223 bp in total length with one large single-copy (LSC; 84,962 bp), one small single-copy (SSC; 12,999 bp), and 2 inverted repeat (IR) regions (IR(a) and IR(b), each with 30,631 bp). The overall GC content was 37.5% and the genome contained 131 genes, including 83 protein-coding, 38 transfer RNA and 8 ribosomal RNA genes. Phylogenetic analysis supported monophyly of subgenus Rumex and determined the phylogenetic position of R. japonicus as sister to the clade containing R. crispus and R. nepalensis. |
format | Online Article Text |
id | pubmed-7706998 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77069982020-12-22 Complete plastome sequence of Rumex japonicus (Polygonaceae) in Dok-do Island, Korea Youn, Jin-Suk Yang, JiYoung Kim, Seung-Chul Pak, Jae-Hong Mitochondrial DNA B Resour Mitogenome Announcement We reported the complete chloroplast genome sequence of Rumex japonicus in Dok-do Island, Korea. The genome size was 159,223 bp in total length with one large single-copy (LSC; 84,962 bp), one small single-copy (SSC; 12,999 bp), and 2 inverted repeat (IR) regions (IR(a) and IR(b), each with 30,631 bp). The overall GC content was 37.5% and the genome contained 131 genes, including 83 protein-coding, 38 transfer RNA and 8 ribosomal RNA genes. Phylogenetic analysis supported monophyly of subgenus Rumex and determined the phylogenetic position of R. japonicus as sister to the clade containing R. crispus and R. nepalensis. Taylor & Francis 2019-09-03 /pmc/articles/PMC7706998/ /pubmed/33365778 http://dx.doi.org/10.1080/23802359.2019.1660274 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Youn, Jin-Suk Yang, JiYoung Kim, Seung-Chul Pak, Jae-Hong Complete plastome sequence of Rumex japonicus (Polygonaceae) in Dok-do Island, Korea |
title | Complete plastome sequence of Rumex japonicus (Polygonaceae) in Dok-do Island, Korea |
title_full | Complete plastome sequence of Rumex japonicus (Polygonaceae) in Dok-do Island, Korea |
title_fullStr | Complete plastome sequence of Rumex japonicus (Polygonaceae) in Dok-do Island, Korea |
title_full_unstemmed | Complete plastome sequence of Rumex japonicus (Polygonaceae) in Dok-do Island, Korea |
title_short | Complete plastome sequence of Rumex japonicus (Polygonaceae) in Dok-do Island, Korea |
title_sort | complete plastome sequence of rumex japonicus (polygonaceae) in dok-do island, korea |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706998/ https://www.ncbi.nlm.nih.gov/pubmed/33365778 http://dx.doi.org/10.1080/23802359.2019.1660274 |
work_keys_str_mv | AT younjinsuk completeplastomesequenceofrumexjaponicuspolygonaceaeindokdoislandkorea AT yangjiyoung completeplastomesequenceofrumexjaponicuspolygonaceaeindokdoislandkorea AT kimseungchul completeplastomesequenceofrumexjaponicuspolygonaceaeindokdoislandkorea AT pakjaehong completeplastomesequenceofrumexjaponicuspolygonaceaeindokdoislandkorea |