Characterization of the complete chloroplast genome of Gerbera jamesonii Bolus in China and phylogenetic relationships

Gerbera (Gerbera jamesonii Bolus) is one of the most popular ornamental flowers and one of the top five cut flowers worldwide. In this study, we presented the complete chloroplast genome of it using BGISEQ-500 sequencing. Its chloroplast genome is 151,898 bp in size, containing a large single copy r...

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Autores principales: Zhang, Yong-Yan, Liu, Fan, Wang, Xing-qi, Shi, Xiao-bao, Tian, Na, Lai, Zhong-Xiong, Cheng, Chun-Zhen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707009/
https://www.ncbi.nlm.nih.gov/pubmed/33365693
http://dx.doi.org/10.1080/23802359.2019.1644230
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author Zhang, Yong-Yan
Liu, Fan
Wang, Xing-qi
Shi, Xiao-bao
Tian, Na
Lai, Zhong-Xiong
Cheng, Chun-Zhen
author_facet Zhang, Yong-Yan
Liu, Fan
Wang, Xing-qi
Shi, Xiao-bao
Tian, Na
Lai, Zhong-Xiong
Cheng, Chun-Zhen
author_sort Zhang, Yong-Yan
collection PubMed
description Gerbera (Gerbera jamesonii Bolus) is one of the most popular ornamental flowers and one of the top five cut flowers worldwide. In this study, we presented the complete chloroplast genome of it using BGISEQ-500 sequencing. Its chloroplast genome is 151,898 bp in size, containing a large single copy region (83,518 bp) and a small single copy region (18,244 bp), and a pair of IR regions (25,068 bp). The chloroplast genome contains 113 unique genes, including 80 protein-coding genes, 29 tRNAs, and 4 rRNAs. Phylogenetic maximum likelihood analysis based on chloroplast genomes of Gerbera and other 17 plant species indicated that the relationship between Gerbera and other plant species of family Compositae is not very close and its relationship with Atractylodes lancea is the closest.
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spelling pubmed-77070092020-12-22 Characterization of the complete chloroplast genome of Gerbera jamesonii Bolus in China and phylogenetic relationships Zhang, Yong-Yan Liu, Fan Wang, Xing-qi Shi, Xiao-bao Tian, Na Lai, Zhong-Xiong Cheng, Chun-Zhen Mitochondrial DNA B Resour Mitogenome Announcement Gerbera (Gerbera jamesonii Bolus) is one of the most popular ornamental flowers and one of the top five cut flowers worldwide. In this study, we presented the complete chloroplast genome of it using BGISEQ-500 sequencing. Its chloroplast genome is 151,898 bp in size, containing a large single copy region (83,518 bp) and a small single copy region (18,244 bp), and a pair of IR regions (25,068 bp). The chloroplast genome contains 113 unique genes, including 80 protein-coding genes, 29 tRNAs, and 4 rRNAs. Phylogenetic maximum likelihood analysis based on chloroplast genomes of Gerbera and other 17 plant species indicated that the relationship between Gerbera and other plant species of family Compositae is not very close and its relationship with Atractylodes lancea is the closest. Taylor & Francis 2019-07-23 /pmc/articles/PMC7707009/ /pubmed/33365693 http://dx.doi.org/10.1080/23802359.2019.1644230 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Zhang, Yong-Yan
Liu, Fan
Wang, Xing-qi
Shi, Xiao-bao
Tian, Na
Lai, Zhong-Xiong
Cheng, Chun-Zhen
Characterization of the complete chloroplast genome of Gerbera jamesonii Bolus in China and phylogenetic relationships
title Characterization of the complete chloroplast genome of Gerbera jamesonii Bolus in China and phylogenetic relationships
title_full Characterization of the complete chloroplast genome of Gerbera jamesonii Bolus in China and phylogenetic relationships
title_fullStr Characterization of the complete chloroplast genome of Gerbera jamesonii Bolus in China and phylogenetic relationships
title_full_unstemmed Characterization of the complete chloroplast genome of Gerbera jamesonii Bolus in China and phylogenetic relationships
title_short Characterization of the complete chloroplast genome of Gerbera jamesonii Bolus in China and phylogenetic relationships
title_sort characterization of the complete chloroplast genome of gerbera jamesonii bolus in china and phylogenetic relationships
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707009/
https://www.ncbi.nlm.nih.gov/pubmed/33365693
http://dx.doi.org/10.1080/23802359.2019.1644230
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