Mitochondrial landscape of indigenous pig germplasm of Andaman and Nicobar Islands

Nicobari pig and Andaman Desi pig are indigenous pig germplasm of Andaman and Nicobar islands, India. Over the last two decades, the pig breeds witnessed a rapid decline in population, necessitating immediate characterization and conservation. The present study depicts the complete mitochondrial gen...

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Autores principales: De, Arun Kumar, Ponraj, Perumal, Kundu, M. S., Muthiyan, Ramachandran, Muniswamy, K., Kundu, A., Malakar, Dhruba, Sunder, Jai, George, Zachariah, Bhattacharya, Debasis
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707010/
https://www.ncbi.nlm.nih.gov/pubmed/33365738
http://dx.doi.org/10.1080/23802359.2019.1660240
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author De, Arun Kumar
Ponraj, Perumal
Kundu, M. S.
Muthiyan, Ramachandran
Muniswamy, K.
Kundu, A.
Malakar, Dhruba
Sunder, Jai
George, Zachariah
Bhattacharya, Debasis
author_facet De, Arun Kumar
Ponraj, Perumal
Kundu, M. S.
Muthiyan, Ramachandran
Muniswamy, K.
Kundu, A.
Malakar, Dhruba
Sunder, Jai
George, Zachariah
Bhattacharya, Debasis
author_sort De, Arun Kumar
collection PubMed
description Nicobari pig and Andaman Desi pig are indigenous pig germplasm of Andaman and Nicobar islands, India. Over the last two decades, the pig breeds witnessed a rapid decline in population, necessitating immediate characterization and conservation. The present study depicts the complete mitochondrial genome sequence of Nicobari pig and Andaman Desi pig. The mitogenomes of both the breeds encode 37 genes including 13 protein coding genes, 22 tRNAs, and two ribosomal RNA genes. In addition, a control region (D-loop) was also present. Phylogenetic analysis showed that Nicobari is phylogenetically close to Banna mini and Breed I pig, whereas Andaman Desi pig is close to Mong cai and Jinhua pig breeds. The results of the study will be helpful for formulating of conservation strategy of the native swine breeds.
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spelling pubmed-77070102020-12-22 Mitochondrial landscape of indigenous pig germplasm of Andaman and Nicobar Islands De, Arun Kumar Ponraj, Perumal Kundu, M. S. Muthiyan, Ramachandran Muniswamy, K. Kundu, A. Malakar, Dhruba Sunder, Jai George, Zachariah Bhattacharya, Debasis Mitochondrial DNA B Resour Mitogenome Announcement Nicobari pig and Andaman Desi pig are indigenous pig germplasm of Andaman and Nicobar islands, India. Over the last two decades, the pig breeds witnessed a rapid decline in population, necessitating immediate characterization and conservation. The present study depicts the complete mitochondrial genome sequence of Nicobari pig and Andaman Desi pig. The mitogenomes of both the breeds encode 37 genes including 13 protein coding genes, 22 tRNAs, and two ribosomal RNA genes. In addition, a control region (D-loop) was also present. Phylogenetic analysis showed that Nicobari is phylogenetically close to Banna mini and Breed I pig, whereas Andaman Desi pig is close to Mong cai and Jinhua pig breeds. The results of the study will be helpful for formulating of conservation strategy of the native swine breeds. Taylor & Francis 2019-09-02 /pmc/articles/PMC7707010/ /pubmed/33365738 http://dx.doi.org/10.1080/23802359.2019.1660240 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
De, Arun Kumar
Ponraj, Perumal
Kundu, M. S.
Muthiyan, Ramachandran
Muniswamy, K.
Kundu, A.
Malakar, Dhruba
Sunder, Jai
George, Zachariah
Bhattacharya, Debasis
Mitochondrial landscape of indigenous pig germplasm of Andaman and Nicobar Islands
title Mitochondrial landscape of indigenous pig germplasm of Andaman and Nicobar Islands
title_full Mitochondrial landscape of indigenous pig germplasm of Andaman and Nicobar Islands
title_fullStr Mitochondrial landscape of indigenous pig germplasm of Andaman and Nicobar Islands
title_full_unstemmed Mitochondrial landscape of indigenous pig germplasm of Andaman and Nicobar Islands
title_short Mitochondrial landscape of indigenous pig germplasm of Andaman and Nicobar Islands
title_sort mitochondrial landscape of indigenous pig germplasm of andaman and nicobar islands
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707010/
https://www.ncbi.nlm.nih.gov/pubmed/33365738
http://dx.doi.org/10.1080/23802359.2019.1660240
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