Cargando…

Effectiveness of Containment Measures Against COVID-19 in Singapore: Implications for Other National Containment Efforts

BACKGROUND: We hypothesize that comprehensive surveillance of COVID-19 in Singapore has facilitated early case detection and prompt contact tracing and, with community-based measures, contained spread. We assessed the effectiveness of containment measures by estimating transmissibility (effective re...

Descripción completa

Detalles Bibliográficos
Autores principales: Pung, Rachael, Cook, Alex R., Chiew, Calvin J., Clapham, Hannah E., Sun, Yinxiaohe, Li, Zongbin, Dickens, Borame L., Ma, Stefan, Mak, Kenneth, Tan, Chorh Chuan, Heng, Derrick, Chen, Mark I-Cheng, Lee, Vernon J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Lippincott Williams & Wilkins 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707159/
https://www.ncbi.nlm.nih.gov/pubmed/33044319
http://dx.doi.org/10.1097/EDE.0000000000001257
_version_ 1783617288710127616
author Pung, Rachael
Cook, Alex R.
Chiew, Calvin J.
Clapham, Hannah E.
Sun, Yinxiaohe
Li, Zongbin
Dickens, Borame L.
Ma, Stefan
Mak, Kenneth
Tan, Chorh Chuan
Heng, Derrick
Chen, Mark I-Cheng
Lee, Vernon J.
author_facet Pung, Rachael
Cook, Alex R.
Chiew, Calvin J.
Clapham, Hannah E.
Sun, Yinxiaohe
Li, Zongbin
Dickens, Borame L.
Ma, Stefan
Mak, Kenneth
Tan, Chorh Chuan
Heng, Derrick
Chen, Mark I-Cheng
Lee, Vernon J.
author_sort Pung, Rachael
collection PubMed
description BACKGROUND: We hypothesize that comprehensive surveillance of COVID-19 in Singapore has facilitated early case detection and prompt contact tracing and, with community-based measures, contained spread. We assessed the effectiveness of containment measures by estimating transmissibility (effective reproduction number, [Image: see text]) over the course of the outbreak. METHODS: We used a Bayesian data augmentation framework to allocate infectors to infectees with no known infectors and determine serial interval distribution parameters via Markov chain Monte Carlo sampling. We fitted a smoothing spline to the number of secondary cases generated by each infector by respective onset dates to estimate [Image: see text] and evaluated increase in mean number of secondary cases per individual for each day’s delay in starting isolation or quarantine. RESULTS: As of April 1, 2020, 1000 COVID-19 cases were reported in Singapore. We estimated a mean serial interval of 4.6 days [95% credible interval (CI) = 4.2, 5.1] with a SD of 3.5 days (95% CI = 3.1, 4.0). The posterior mean [Image: see text] was below one for most of the time, peaking at 1.1 (95% CI = 1.0, 1.3) on week 9 of 2020 due to a spreading event in one of the clusters. Eight hundred twenty-seven (82.7%) of cases infected less than one person on average. Over an interval of 7 days, the incremental mean number of cases generated per individual for each day’s delay in starting isolation or quarantine was 0.03 cases (95% CI = 0.02, 0.05). CONCLUSIONS: We estimate that robust surveillance, active case detection, prompt contact tracing, and quarantine of close contacts kept [Image: see text] below one.
format Online
Article
Text
id pubmed-7707159
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher Lippincott Williams & Wilkins
record_format MEDLINE/PubMed
spelling pubmed-77071592020-12-08 Effectiveness of Containment Measures Against COVID-19 in Singapore: Implications for Other National Containment Efforts Pung, Rachael Cook, Alex R. Chiew, Calvin J. Clapham, Hannah E. Sun, Yinxiaohe Li, Zongbin Dickens, Borame L. Ma, Stefan Mak, Kenneth Tan, Chorh Chuan Heng, Derrick Chen, Mark I-Cheng Lee, Vernon J. Epidemiology Infectious Diseases BACKGROUND: We hypothesize that comprehensive surveillance of COVID-19 in Singapore has facilitated early case detection and prompt contact tracing and, with community-based measures, contained spread. We assessed the effectiveness of containment measures by estimating transmissibility (effective reproduction number, [Image: see text]) over the course of the outbreak. METHODS: We used a Bayesian data augmentation framework to allocate infectors to infectees with no known infectors and determine serial interval distribution parameters via Markov chain Monte Carlo sampling. We fitted a smoothing spline to the number of secondary cases generated by each infector by respective onset dates to estimate [Image: see text] and evaluated increase in mean number of secondary cases per individual for each day’s delay in starting isolation or quarantine. RESULTS: As of April 1, 2020, 1000 COVID-19 cases were reported in Singapore. We estimated a mean serial interval of 4.6 days [95% credible interval (CI) = 4.2, 5.1] with a SD of 3.5 days (95% CI = 3.1, 4.0). The posterior mean [Image: see text] was below one for most of the time, peaking at 1.1 (95% CI = 1.0, 1.3) on week 9 of 2020 due to a spreading event in one of the clusters. Eight hundred twenty-seven (82.7%) of cases infected less than one person on average. Over an interval of 7 days, the incremental mean number of cases generated per individual for each day’s delay in starting isolation or quarantine was 0.03 cases (95% CI = 0.02, 0.05). CONCLUSIONS: We estimate that robust surveillance, active case detection, prompt contact tracing, and quarantine of close contacts kept [Image: see text] below one. Lippincott Williams & Wilkins 2020-10-07 2021-01 /pmc/articles/PMC7707159/ /pubmed/33044319 http://dx.doi.org/10.1097/EDE.0000000000001257 Text en Copyright © 2020 The Author(s). Published by Wolters Kluwer Health, Inc. This is an open-access article distributed under the terms of the Creative Commons Attribution-Non Commercial-No Derivatives License 4.0 (CCBY-NC-ND) (http://creativecommons.org/licenses/by-nc-nd/4.0/) , where it is permissible to download and share the work provided it is properly cited. The work cannot be changed in any way or used commercially without permission from the journal.
spellingShingle Infectious Diseases
Pung, Rachael
Cook, Alex R.
Chiew, Calvin J.
Clapham, Hannah E.
Sun, Yinxiaohe
Li, Zongbin
Dickens, Borame L.
Ma, Stefan
Mak, Kenneth
Tan, Chorh Chuan
Heng, Derrick
Chen, Mark I-Cheng
Lee, Vernon J.
Effectiveness of Containment Measures Against COVID-19 in Singapore: Implications for Other National Containment Efforts
title Effectiveness of Containment Measures Against COVID-19 in Singapore: Implications for Other National Containment Efforts
title_full Effectiveness of Containment Measures Against COVID-19 in Singapore: Implications for Other National Containment Efforts
title_fullStr Effectiveness of Containment Measures Against COVID-19 in Singapore: Implications for Other National Containment Efforts
title_full_unstemmed Effectiveness of Containment Measures Against COVID-19 in Singapore: Implications for Other National Containment Efforts
title_short Effectiveness of Containment Measures Against COVID-19 in Singapore: Implications for Other National Containment Efforts
title_sort effectiveness of containment measures against covid-19 in singapore: implications for other national containment efforts
topic Infectious Diseases
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707159/
https://www.ncbi.nlm.nih.gov/pubmed/33044319
http://dx.doi.org/10.1097/EDE.0000000000001257
work_keys_str_mv AT pungrachael effectivenessofcontainmentmeasuresagainstcovid19insingaporeimplicationsforothernationalcontainmentefforts
AT cookalexr effectivenessofcontainmentmeasuresagainstcovid19insingaporeimplicationsforothernationalcontainmentefforts
AT chiewcalvinj effectivenessofcontainmentmeasuresagainstcovid19insingaporeimplicationsforothernationalcontainmentefforts
AT claphamhannahe effectivenessofcontainmentmeasuresagainstcovid19insingaporeimplicationsforothernationalcontainmentefforts
AT sunyinxiaohe effectivenessofcontainmentmeasuresagainstcovid19insingaporeimplicationsforothernationalcontainmentefforts
AT lizongbin effectivenessofcontainmentmeasuresagainstcovid19insingaporeimplicationsforothernationalcontainmentefforts
AT dickensboramel effectivenessofcontainmentmeasuresagainstcovid19insingaporeimplicationsforothernationalcontainmentefforts
AT mastefan effectivenessofcontainmentmeasuresagainstcovid19insingaporeimplicationsforothernationalcontainmentefforts
AT makkenneth effectivenessofcontainmentmeasuresagainstcovid19insingaporeimplicationsforothernationalcontainmentefforts
AT tanchorhchuan effectivenessofcontainmentmeasuresagainstcovid19insingaporeimplicationsforothernationalcontainmentefforts
AT hengderrick effectivenessofcontainmentmeasuresagainstcovid19insingaporeimplicationsforothernationalcontainmentefforts
AT chenmarkicheng effectivenessofcontainmentmeasuresagainstcovid19insingaporeimplicationsforothernationalcontainmentefforts
AT leevernonj effectivenessofcontainmentmeasuresagainstcovid19insingaporeimplicationsforothernationalcontainmentefforts