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The complete chloroplast genome of Pholidota imbricata (Orchidaceae)
Pholidota imbricata belongs to tribe Coelogninae in Orchidaceae distributed in Sichuan, Xizang, and Yunnan. Here, we report the first complete chloroplast (cp) genome and the cp genome features of P. imbricata. The complete cp genome sequence of P. imbricata is 159,292 bp in length and presented a t...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707197/ https://www.ncbi.nlm.nih.gov/pubmed/33366068 http://dx.doi.org/10.1080/23802359.2019.1675549 |
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author | Rao, Wen-Hui Huang, Jie Li, Li-Qiang Li, Ting-Zhang Kong, De-Min Chen, Jian-Bing |
author_facet | Rao, Wen-Hui Huang, Jie Li, Li-Qiang Li, Ting-Zhang Kong, De-Min Chen, Jian-Bing |
author_sort | Rao, Wen-Hui |
collection | PubMed |
description | Pholidota imbricata belongs to tribe Coelogninae in Orchidaceae distributed in Sichuan, Xizang, and Yunnan. Here, we report the first complete chloroplast (cp) genome and the cp genome features of P. imbricata. The complete cp genome sequence of P. imbricata is 159,292 bp in length and presented a typical quadripartite structure including one large single-copy region (LSC, 87,515 bp), one small single-copy region (SSC, 20,999 bp), and two inverted repeat regions (IRs, 25,389 bp each). The cp genome encoded 141 genes, of which 108 were unique genes (80 protein-coding genes, 24 tRNAs, and 4 rRNAs). The phylogenetic relationships show that P. imbricata is sister to the species of the genus Pleione in tribe Coelogninae. |
format | Online Article Text |
id | pubmed-7707197 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77071972020-12-22 The complete chloroplast genome of Pholidota imbricata (Orchidaceae) Rao, Wen-Hui Huang, Jie Li, Li-Qiang Li, Ting-Zhang Kong, De-Min Chen, Jian-Bing Mitochondrial DNA B Resour Mitogenome Announcement Pholidota imbricata belongs to tribe Coelogninae in Orchidaceae distributed in Sichuan, Xizang, and Yunnan. Here, we report the first complete chloroplast (cp) genome and the cp genome features of P. imbricata. The complete cp genome sequence of P. imbricata is 159,292 bp in length and presented a typical quadripartite structure including one large single-copy region (LSC, 87,515 bp), one small single-copy region (SSC, 20,999 bp), and two inverted repeat regions (IRs, 25,389 bp each). The cp genome encoded 141 genes, of which 108 were unique genes (80 protein-coding genes, 24 tRNAs, and 4 rRNAs). The phylogenetic relationships show that P. imbricata is sister to the species of the genus Pleione in tribe Coelogninae. Taylor & Francis 2019-10-11 /pmc/articles/PMC7707197/ /pubmed/33366068 http://dx.doi.org/10.1080/23802359.2019.1675549 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Rao, Wen-Hui Huang, Jie Li, Li-Qiang Li, Ting-Zhang Kong, De-Min Chen, Jian-Bing The complete chloroplast genome of Pholidota imbricata (Orchidaceae) |
title | The complete chloroplast genome of Pholidota imbricata (Orchidaceae) |
title_full | The complete chloroplast genome of Pholidota imbricata (Orchidaceae) |
title_fullStr | The complete chloroplast genome of Pholidota imbricata (Orchidaceae) |
title_full_unstemmed | The complete chloroplast genome of Pholidota imbricata (Orchidaceae) |
title_short | The complete chloroplast genome of Pholidota imbricata (Orchidaceae) |
title_sort | complete chloroplast genome of pholidota imbricata (orchidaceae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707197/ https://www.ncbi.nlm.nih.gov/pubmed/33366068 http://dx.doi.org/10.1080/23802359.2019.1675549 |
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