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The complete chloroplast genomes of Trollius farreri and Anemone taipaiensis (Ranunculaceae)
Ranunculaceae, with high morphological biodiversity and widely ecological amplitude tolerance, has been considered as a new good model for adaptive evolution study. In this study, two high-quality chloroplast genomes of Ranunculaceae were determined by next-generation sequencing technologies. The pl...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707199/ https://www.ncbi.nlm.nih.gov/pubmed/33365951 http://dx.doi.org/10.1080/23802359.2019.1671248 |
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author | Yu, Ben Zhang, Ruiting Yang, Qian Xu, Bei Liu, Zhan-Lin |
author_facet | Yu, Ben Zhang, Ruiting Yang, Qian Xu, Bei Liu, Zhan-Lin |
author_sort | Yu, Ben |
collection | PubMed |
description | Ranunculaceae, with high morphological biodiversity and widely ecological amplitude tolerance, has been considered as a new good model for adaptive evolution study. In this study, two high-quality chloroplast genomes of Ranunculaceae were determined by next-generation sequencing technologies. The plastomes of Trollius farreri and Anemone taipaiensis exhibit a conserved quadripartite structure, with 160,612 bp and 160,214 bp in length, presenting similar GC contents (38% and 37.6%). The chloroplast genome of Trollius farreri contains 131 genes, including 87 protein-coding genes, 8 rRNA, and 36 tRNA genes, while the plastome of Anemone taipaiensis harbours 137 genes, including 93 protein-coding genes, 8 rRNA, and 36 tRNA genes. Phylogenetic tree constructed with 21 plastomes of Ranunculaceae species indicates that Trollius farreri and Anemone taipaiensis are closely related to their congeneric species, respectively. The phylogenetic relationships are inconsistent with the current classification of Ranunculaceae. |
format | Online Article Text |
id | pubmed-7707199 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77071992020-12-22 The complete chloroplast genomes of Trollius farreri and Anemone taipaiensis (Ranunculaceae) Yu, Ben Zhang, Ruiting Yang, Qian Xu, Bei Liu, Zhan-Lin Mitochondrial DNA B Resour Mitogenome Announcement Ranunculaceae, with high morphological biodiversity and widely ecological amplitude tolerance, has been considered as a new good model for adaptive evolution study. In this study, two high-quality chloroplast genomes of Ranunculaceae were determined by next-generation sequencing technologies. The plastomes of Trollius farreri and Anemone taipaiensis exhibit a conserved quadripartite structure, with 160,612 bp and 160,214 bp in length, presenting similar GC contents (38% and 37.6%). The chloroplast genome of Trollius farreri contains 131 genes, including 87 protein-coding genes, 8 rRNA, and 36 tRNA genes, while the plastome of Anemone taipaiensis harbours 137 genes, including 93 protein-coding genes, 8 rRNA, and 36 tRNA genes. Phylogenetic tree constructed with 21 plastomes of Ranunculaceae species indicates that Trollius farreri and Anemone taipaiensis are closely related to their congeneric species, respectively. The phylogenetic relationships are inconsistent with the current classification of Ranunculaceae. Taylor & Francis 2019-09-27 /pmc/articles/PMC7707199/ /pubmed/33365951 http://dx.doi.org/10.1080/23802359.2019.1671248 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Yu, Ben Zhang, Ruiting Yang, Qian Xu, Bei Liu, Zhan-Lin The complete chloroplast genomes of Trollius farreri and Anemone taipaiensis (Ranunculaceae) |
title | The complete chloroplast genomes of Trollius farreri and Anemone taipaiensis (Ranunculaceae) |
title_full | The complete chloroplast genomes of Trollius farreri and Anemone taipaiensis (Ranunculaceae) |
title_fullStr | The complete chloroplast genomes of Trollius farreri and Anemone taipaiensis (Ranunculaceae) |
title_full_unstemmed | The complete chloroplast genomes of Trollius farreri and Anemone taipaiensis (Ranunculaceae) |
title_short | The complete chloroplast genomes of Trollius farreri and Anemone taipaiensis (Ranunculaceae) |
title_sort | complete chloroplast genomes of trollius farreri and anemone taipaiensis (ranunculaceae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707199/ https://www.ncbi.nlm.nih.gov/pubmed/33365951 http://dx.doi.org/10.1080/23802359.2019.1671248 |
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