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Complete chloroplast genome of Erythropsis kwangsiensis (Sterculiaceae), an endemic wild tree from South China
Erythropsis kwangsiensis (Sterculiaceae), a wild endangered tree that grows in South China, is an economically important species. There is scant information available on the chloroplast (cp) genome of this species. The present study is the first to analyze the cp genome of E. kwangsiensis using geno...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707203/ https://www.ncbi.nlm.nih.gov/pubmed/33366212 http://dx.doi.org/10.1080/23802359.2019.1670111 |
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author | Tian, Xinmin Qu, Zezohng Tuerdi, Rayhangul Abudourexiti, Aynur Payzilla, Zulpenur Parhat, Paherdin Wang, Yongfeng Li, Chaoyong Mamtimin, Sulayman |
author_facet | Tian, Xinmin Qu, Zezohng Tuerdi, Rayhangul Abudourexiti, Aynur Payzilla, Zulpenur Parhat, Paherdin Wang, Yongfeng Li, Chaoyong Mamtimin, Sulayman |
author_sort | Tian, Xinmin |
collection | PubMed |
description | Erythropsis kwangsiensis (Sterculiaceae), a wild endangered tree that grows in South China, is an economically important species. There is scant information available on the chloroplast (cp) genome of this species. The present study is the first to analyze the cp genome of E. kwangsiensis using genome skimming. The whole cp genome is 160,836 bp long with 131 genes, including 84 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. The GC content is 37.0%. Phylogenetic analysis revealed a close relationship to Firmiana colorata. This data will be useful for future investigations of conservation genetics and potential applications in breeding new varieties of this endangered and economically important tree. |
format | Online Article Text |
id | pubmed-7707203 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77072032020-12-22 Complete chloroplast genome of Erythropsis kwangsiensis (Sterculiaceae), an endemic wild tree from South China Tian, Xinmin Qu, Zezohng Tuerdi, Rayhangul Abudourexiti, Aynur Payzilla, Zulpenur Parhat, Paherdin Wang, Yongfeng Li, Chaoyong Mamtimin, Sulayman Mitochondrial DNA B Resour Mitogenome Announcement Erythropsis kwangsiensis (Sterculiaceae), a wild endangered tree that grows in South China, is an economically important species. There is scant information available on the chloroplast (cp) genome of this species. The present study is the first to analyze the cp genome of E. kwangsiensis using genome skimming. The whole cp genome is 160,836 bp long with 131 genes, including 84 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. The GC content is 37.0%. Phylogenetic analysis revealed a close relationship to Firmiana colorata. This data will be useful for future investigations of conservation genetics and potential applications in breeding new varieties of this endangered and economically important tree. Taylor & Francis 2019-11-05 /pmc/articles/PMC7707203/ /pubmed/33366212 http://dx.doi.org/10.1080/23802359.2019.1670111 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Tian, Xinmin Qu, Zezohng Tuerdi, Rayhangul Abudourexiti, Aynur Payzilla, Zulpenur Parhat, Paherdin Wang, Yongfeng Li, Chaoyong Mamtimin, Sulayman Complete chloroplast genome of Erythropsis kwangsiensis (Sterculiaceae), an endemic wild tree from South China |
title | Complete chloroplast genome of Erythropsis kwangsiensis (Sterculiaceae), an endemic wild tree from South China |
title_full | Complete chloroplast genome of Erythropsis kwangsiensis (Sterculiaceae), an endemic wild tree from South China |
title_fullStr | Complete chloroplast genome of Erythropsis kwangsiensis (Sterculiaceae), an endemic wild tree from South China |
title_full_unstemmed | Complete chloroplast genome of Erythropsis kwangsiensis (Sterculiaceae), an endemic wild tree from South China |
title_short | Complete chloroplast genome of Erythropsis kwangsiensis (Sterculiaceae), an endemic wild tree from South China |
title_sort | complete chloroplast genome of erythropsis kwangsiensis (sterculiaceae), an endemic wild tree from south china |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707203/ https://www.ncbi.nlm.nih.gov/pubmed/33366212 http://dx.doi.org/10.1080/23802359.2019.1670111 |
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