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Complete chloroplast genome of Dendrobium thyrsiflorum (Orchidaceae)
Dendrobium thyrsiflorum H. G. Reichenbach ex André is an endemic herb with ornamental and medicinal orchid value distributed in Southeast of Yunnan of China. Here, we report and characterize the complete chloroplast (cp) genome sequence of D. thyrsiflorum in order to provide genomic resources helpfu...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707218/ https://www.ncbi.nlm.nih.gov/pubmed/33365914 http://dx.doi.org/10.1080/23802359.2019.1667918 |
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author | Pan, Yun-Yun Li, Ting-Zhang Chen, Jian-Bing Huang, Jie Rao, Wen-Hui |
author_facet | Pan, Yun-Yun Li, Ting-Zhang Chen, Jian-Bing Huang, Jie Rao, Wen-Hui |
author_sort | Pan, Yun-Yun |
collection | PubMed |
description | Dendrobium thyrsiflorum H. G. Reichenbach ex André is an endemic herb with ornamental and medicinal orchid value distributed in Southeast of Yunnan of China. Here, we report and characterize the complete chloroplast (cp) genome sequence of D. thyrsiflorum in order to provide genomic resources helpful for its identification, conservation and utilization. The complete cp genome of D. thyrsiflorum is 160,123 bp, including one large single-copy region (LSC, 88,001), one small single-copy region (SSC, 21,142), and two inverted repeat regions (IRs, 25,490). The cp genome contains 143 genes, consisting of 110 unique genes (80 protein-coding genes, 26 tRNAs, and 4 rRNAS). The phlyogenetic relationships show that D. thyrsiflorum is closely related to other species of Dendrobium. |
format | Online Article Text |
id | pubmed-7707218 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77072182020-12-22 Complete chloroplast genome of Dendrobium thyrsiflorum (Orchidaceae) Pan, Yun-Yun Li, Ting-Zhang Chen, Jian-Bing Huang, Jie Rao, Wen-Hui Mitochondrial DNA B Resour Mitogenome Announcement Dendrobium thyrsiflorum H. G. Reichenbach ex André is an endemic herb with ornamental and medicinal orchid value distributed in Southeast of Yunnan of China. Here, we report and characterize the complete chloroplast (cp) genome sequence of D. thyrsiflorum in order to provide genomic resources helpful for its identification, conservation and utilization. The complete cp genome of D. thyrsiflorum is 160,123 bp, including one large single-copy region (LSC, 88,001), one small single-copy region (SSC, 21,142), and two inverted repeat regions (IRs, 25,490). The cp genome contains 143 genes, consisting of 110 unique genes (80 protein-coding genes, 26 tRNAs, and 4 rRNAS). The phlyogenetic relationships show that D. thyrsiflorum is closely related to other species of Dendrobium. Taylor & Francis 2019-09-23 /pmc/articles/PMC7707218/ /pubmed/33365914 http://dx.doi.org/10.1080/23802359.2019.1667918 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Pan, Yun-Yun Li, Ting-Zhang Chen, Jian-Bing Huang, Jie Rao, Wen-Hui Complete chloroplast genome of Dendrobium thyrsiflorum (Orchidaceae) |
title | Complete chloroplast genome of Dendrobium thyrsiflorum (Orchidaceae) |
title_full | Complete chloroplast genome of Dendrobium thyrsiflorum (Orchidaceae) |
title_fullStr | Complete chloroplast genome of Dendrobium thyrsiflorum (Orchidaceae) |
title_full_unstemmed | Complete chloroplast genome of Dendrobium thyrsiflorum (Orchidaceae) |
title_short | Complete chloroplast genome of Dendrobium thyrsiflorum (Orchidaceae) |
title_sort | complete chloroplast genome of dendrobium thyrsiflorum (orchidaceae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707218/ https://www.ncbi.nlm.nih.gov/pubmed/33365914 http://dx.doi.org/10.1080/23802359.2019.1667918 |
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