Cargando…

Complete chloroplast genome of Dendrobium thyrsiflorum (Orchidaceae)

Dendrobium thyrsiflorum H. G. Reichenbach ex André is an endemic herb with ornamental and medicinal orchid value distributed in Southeast of Yunnan of China. Here, we report and characterize the complete chloroplast (cp) genome sequence of D. thyrsiflorum in order to provide genomic resources helpfu...

Descripción completa

Detalles Bibliográficos
Autores principales: Pan, Yun-Yun, Li, Ting-Zhang, Chen, Jian-Bing, Huang, Jie, Rao, Wen-Hui
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707218/
https://www.ncbi.nlm.nih.gov/pubmed/33365914
http://dx.doi.org/10.1080/23802359.2019.1667918
_version_ 1783617297696423936
author Pan, Yun-Yun
Li, Ting-Zhang
Chen, Jian-Bing
Huang, Jie
Rao, Wen-Hui
author_facet Pan, Yun-Yun
Li, Ting-Zhang
Chen, Jian-Bing
Huang, Jie
Rao, Wen-Hui
author_sort Pan, Yun-Yun
collection PubMed
description Dendrobium thyrsiflorum H. G. Reichenbach ex André is an endemic herb with ornamental and medicinal orchid value distributed in Southeast of Yunnan of China. Here, we report and characterize the complete chloroplast (cp) genome sequence of D. thyrsiflorum in order to provide genomic resources helpful for its identification, conservation and utilization. The complete cp genome of D. thyrsiflorum is 160,123 bp, including one large single-copy region (LSC, 88,001), one small single-copy region (SSC, 21,142), and two inverted repeat regions (IRs, 25,490). The cp genome contains 143 genes, consisting of 110 unique genes (80 protein-coding genes, 26 tRNAs, and 4 rRNAS). The phlyogenetic relationships show that D. thyrsiflorum is closely related to other species of Dendrobium.
format Online
Article
Text
id pubmed-7707218
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-77072182020-12-22 Complete chloroplast genome of Dendrobium thyrsiflorum (Orchidaceae) Pan, Yun-Yun Li, Ting-Zhang Chen, Jian-Bing Huang, Jie Rao, Wen-Hui Mitochondrial DNA B Resour Mitogenome Announcement Dendrobium thyrsiflorum H. G. Reichenbach ex André is an endemic herb with ornamental and medicinal orchid value distributed in Southeast of Yunnan of China. Here, we report and characterize the complete chloroplast (cp) genome sequence of D. thyrsiflorum in order to provide genomic resources helpful for its identification, conservation and utilization. The complete cp genome of D. thyrsiflorum is 160,123 bp, including one large single-copy region (LSC, 88,001), one small single-copy region (SSC, 21,142), and two inverted repeat regions (IRs, 25,490). The cp genome contains 143 genes, consisting of 110 unique genes (80 protein-coding genes, 26 tRNAs, and 4 rRNAS). The phlyogenetic relationships show that D. thyrsiflorum is closely related to other species of Dendrobium. Taylor & Francis 2019-09-23 /pmc/articles/PMC7707218/ /pubmed/33365914 http://dx.doi.org/10.1080/23802359.2019.1667918 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Pan, Yun-Yun
Li, Ting-Zhang
Chen, Jian-Bing
Huang, Jie
Rao, Wen-Hui
Complete chloroplast genome of Dendrobium thyrsiflorum (Orchidaceae)
title Complete chloroplast genome of Dendrobium thyrsiflorum (Orchidaceae)
title_full Complete chloroplast genome of Dendrobium thyrsiflorum (Orchidaceae)
title_fullStr Complete chloroplast genome of Dendrobium thyrsiflorum (Orchidaceae)
title_full_unstemmed Complete chloroplast genome of Dendrobium thyrsiflorum (Orchidaceae)
title_short Complete chloroplast genome of Dendrobium thyrsiflorum (Orchidaceae)
title_sort complete chloroplast genome of dendrobium thyrsiflorum (orchidaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707218/
https://www.ncbi.nlm.nih.gov/pubmed/33365914
http://dx.doi.org/10.1080/23802359.2019.1667918
work_keys_str_mv AT panyunyun completechloroplastgenomeofdendrobiumthyrsiflorumorchidaceae
AT litingzhang completechloroplastgenomeofdendrobiumthyrsiflorumorchidaceae
AT chenjianbing completechloroplastgenomeofdendrobiumthyrsiflorumorchidaceae
AT huangjie completechloroplastgenomeofdendrobiumthyrsiflorumorchidaceae
AT raowenhui completechloroplastgenomeofdendrobiumthyrsiflorumorchidaceae