Cargando…
The chloroplast genome of aromatic plants Cinnamomum burmanni (Lauraceae)
Cinnamomum burmanni (Nees et T. Nees) Blume is a valuable aromatic timber tree of the genus Cinnamomum Tree in the family Lauraceae. To better determine its phylogenetic location with respect to the other Cinnamomum species, the complete chloroplast genome of C. burmanni was sequenced. The total chl...
Autores principales: | , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2019
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707236/ https://www.ncbi.nlm.nih.gov/pubmed/33366110 http://dx.doi.org/10.1080/23802359.2019.1676677 |
_version_ | 1783617301655846912 |
---|---|
author | Yang, Yanping Song, Yu Xin, Peiyao |
author_facet | Yang, Yanping Song, Yu Xin, Peiyao |
author_sort | Yang, Yanping |
collection | PubMed |
description | Cinnamomum burmanni (Nees et T. Nees) Blume is a valuable aromatic timber tree of the genus Cinnamomum Tree in the family Lauraceae. To better determine its phylogenetic location with respect to the other Cinnamomum species, the complete chloroplast genome of C. burmanni was sequenced. The total chloroplast genome size is 152,775 bp, consisting of a pair of inverted repeats (IRa/b) with a length of 20,092 bp separated by a large single-copy region (LSC) and a small single-copy region (SSC) which are 93,687 and 18,903 bp, respectively. The overall GC content of the cp genome is 39.1%. Further, maximum-likelihood phylogenetic analysis with K3Pu + F+I model was performed using eleven complete plastomes of the Lauraceae, which revealed that C. burmanni is closely related to C. verum. |
format | Online Article Text |
id | pubmed-7707236 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77072362020-12-22 The chloroplast genome of aromatic plants Cinnamomum burmanni (Lauraceae) Yang, Yanping Song, Yu Xin, Peiyao Mitochondrial DNA B Resour Mitogenome Announcement Cinnamomum burmanni (Nees et T. Nees) Blume is a valuable aromatic timber tree of the genus Cinnamomum Tree in the family Lauraceae. To better determine its phylogenetic location with respect to the other Cinnamomum species, the complete chloroplast genome of C. burmanni was sequenced. The total chloroplast genome size is 152,775 bp, consisting of a pair of inverted repeats (IRa/b) with a length of 20,092 bp separated by a large single-copy region (LSC) and a small single-copy region (SSC) which are 93,687 and 18,903 bp, respectively. The overall GC content of the cp genome is 39.1%. Further, maximum-likelihood phylogenetic analysis with K3Pu + F+I model was performed using eleven complete plastomes of the Lauraceae, which revealed that C. burmanni is closely related to C. verum. Taylor & Francis 2019-10-16 /pmc/articles/PMC7707236/ /pubmed/33366110 http://dx.doi.org/10.1080/23802359.2019.1676677 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Yang, Yanping Song, Yu Xin, Peiyao The chloroplast genome of aromatic plants Cinnamomum burmanni (Lauraceae) |
title | The chloroplast genome of aromatic plants Cinnamomum burmanni (Lauraceae) |
title_full | The chloroplast genome of aromatic plants Cinnamomum burmanni (Lauraceae) |
title_fullStr | The chloroplast genome of aromatic plants Cinnamomum burmanni (Lauraceae) |
title_full_unstemmed | The chloroplast genome of aromatic plants Cinnamomum burmanni (Lauraceae) |
title_short | The chloroplast genome of aromatic plants Cinnamomum burmanni (Lauraceae) |
title_sort | chloroplast genome of aromatic plants cinnamomum burmanni (lauraceae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707236/ https://www.ncbi.nlm.nih.gov/pubmed/33366110 http://dx.doi.org/10.1080/23802359.2019.1676677 |
work_keys_str_mv | AT yangyanping thechloroplastgenomeofaromaticplantscinnamomumburmannilauraceae AT songyu thechloroplastgenomeofaromaticplantscinnamomumburmannilauraceae AT xinpeiyao thechloroplastgenomeofaromaticplantscinnamomumburmannilauraceae AT yangyanping chloroplastgenomeofaromaticplantscinnamomumburmannilauraceae AT songyu chloroplastgenomeofaromaticplantscinnamomumburmannilauraceae AT xinpeiyao chloroplastgenomeofaromaticplantscinnamomumburmannilauraceae |