The complete chloroplast genome sequence of an economic plant Salix wilsonii

In this study, we report the first complete chloroplast (cp) genome sequence of Salix wilsonii. The cp genome is 155,026 bp in length, exhibiting a typical quadripartite structure of a large single copy (LSC) region of 83,917 bp, a small single copy (SSC) region of 16,285 bp and a pair of inverted r...

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Detalles Bibliográficos
Autores principales: Wu, Dongyang, Wang, Yupeng, Zhang, Li
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707237/
https://www.ncbi.nlm.nih.gov/pubmed/33366085
http://dx.doi.org/10.1080/23802359.2019.1668311
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author Wu, Dongyang
Wang, Yupeng
Zhang, Li
author_facet Wu, Dongyang
Wang, Yupeng
Zhang, Li
author_sort Wu, Dongyang
collection PubMed
description In this study, we report the first complete chloroplast (cp) genome sequence of Salix wilsonii. The cp genome is 155,026 bp in length, exhibiting a typical quadripartite structure of a large single copy (LSC) region of 83,917 bp, a small single copy (SSC) region of 16,285 bp and a pair of inverted repeats (IRs) region of 27,412 bp. The overall base composition of the cp genome in asymmetric order is A: 32.09%, C: 17.94%, G: 18.65%, and T: 31.31%, and the AT content is 63.4%, whereas the proportions of AT contents in LSC, SSC, and IR regions are 66.53%, 68.99%, and 58.27%, respectively. Further, phylogenetic analysis of 46 species shows that S. wilsonii is evolutionarily closest to Sailx tetrasperma, and both of them belong to the genus Salix.
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spelling pubmed-77072372020-12-22 The complete chloroplast genome sequence of an economic plant Salix wilsonii Wu, Dongyang Wang, Yupeng Zhang, Li Mitochondrial DNA B Resour Mitogenome Announcement In this study, we report the first complete chloroplast (cp) genome sequence of Salix wilsonii. The cp genome is 155,026 bp in length, exhibiting a typical quadripartite structure of a large single copy (LSC) region of 83,917 bp, a small single copy (SSC) region of 16,285 bp and a pair of inverted repeats (IRs) region of 27,412 bp. The overall base composition of the cp genome in asymmetric order is A: 32.09%, C: 17.94%, G: 18.65%, and T: 31.31%, and the AT content is 63.4%, whereas the proportions of AT contents in LSC, SSC, and IR regions are 66.53%, 68.99%, and 58.27%, respectively. Further, phylogenetic analysis of 46 species shows that S. wilsonii is evolutionarily closest to Sailx tetrasperma, and both of them belong to the genus Salix. Taylor & Francis 2019-10-15 /pmc/articles/PMC7707237/ /pubmed/33366085 http://dx.doi.org/10.1080/23802359.2019.1668311 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Wu, Dongyang
Wang, Yupeng
Zhang, Li
The complete chloroplast genome sequence of an economic plant Salix wilsonii
title The complete chloroplast genome sequence of an economic plant Salix wilsonii
title_full The complete chloroplast genome sequence of an economic plant Salix wilsonii
title_fullStr The complete chloroplast genome sequence of an economic plant Salix wilsonii
title_full_unstemmed The complete chloroplast genome sequence of an economic plant Salix wilsonii
title_short The complete chloroplast genome sequence of an economic plant Salix wilsonii
title_sort complete chloroplast genome sequence of an economic plant salix wilsonii
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707237/
https://www.ncbi.nlm.nih.gov/pubmed/33366085
http://dx.doi.org/10.1080/23802359.2019.1668311
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