The complete chloroplast genome of a commercially exploited ornamental plant, Bougainvillea glabra (Caryophyllales: Nyctaginaceae)

Bougainvillea glabra is an ornamental plant that is domesticated in many tropical and sub-tropical countries. The focus on its breeding programmes has overshadowed genetic studies of this important species. In this study, we reported on the complete chloroplast (cp) genome of B. glabra. The cp genom...

Descripción completa

Detalles Bibliográficos
Autores principales: Ni, Jianzhong, Lee, Shiou Yih, Hu, Xing, Wang, Wei, Zhang, Jifang, Ruan, Lin, Dai, Seping, Liu, Guofeng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707241/
https://www.ncbi.nlm.nih.gov/pubmed/33366007
http://dx.doi.org/10.1080/23802359.2019.1674721
_version_ 1783617302614245376
author Ni, Jianzhong
Lee, Shiou Yih
Hu, Xing
Wang, Wei
Zhang, Jifang
Ruan, Lin
Dai, Seping
Liu, Guofeng
author_facet Ni, Jianzhong
Lee, Shiou Yih
Hu, Xing
Wang, Wei
Zhang, Jifang
Ruan, Lin
Dai, Seping
Liu, Guofeng
author_sort Ni, Jianzhong
collection PubMed
description Bougainvillea glabra is an ornamental plant that is domesticated in many tropical and sub-tropical countries. The focus on its breeding programmes has overshadowed genetic studies of this important species. In this study, we reported on the complete chloroplast (cp) genome of B. glabra. The cp genome is 154,763 bp in size, comprised of a large single copy (LSC) region of 85,921 bp, a small single copy (SSC) region of 18,018 bp, and a pair of inverted repeat (IR) regions of 25,412 bp each. A total of 131 genes were predicted, including 37 tRNA, 8 rRNA, and 86 protein-coding genes. Phylogenetic analysis revealed that B. glabra is placed under Nyctaginaceae and sister to B. spectabilis under a strong bootstrap support.
format Online
Article
Text
id pubmed-7707241
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-77072412020-12-22 The complete chloroplast genome of a commercially exploited ornamental plant, Bougainvillea glabra (Caryophyllales: Nyctaginaceae) Ni, Jianzhong Lee, Shiou Yih Hu, Xing Wang, Wei Zhang, Jifang Ruan, Lin Dai, Seping Liu, Guofeng Mitochondrial DNA B Resour Mitogenome Announcement Bougainvillea glabra is an ornamental plant that is domesticated in many tropical and sub-tropical countries. The focus on its breeding programmes has overshadowed genetic studies of this important species. In this study, we reported on the complete chloroplast (cp) genome of B. glabra. The cp genome is 154,763 bp in size, comprised of a large single copy (LSC) region of 85,921 bp, a small single copy (SSC) region of 18,018 bp, and a pair of inverted repeat (IR) regions of 25,412 bp each. A total of 131 genes were predicted, including 37 tRNA, 8 rRNA, and 86 protein-coding genes. Phylogenetic analysis revealed that B. glabra is placed under Nyctaginaceae and sister to B. spectabilis under a strong bootstrap support. Taylor & Francis 2019-10-07 /pmc/articles/PMC7707241/ /pubmed/33366007 http://dx.doi.org/10.1080/23802359.2019.1674721 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by-nc/4.0/
spellingShingle Mitogenome Announcement
Ni, Jianzhong
Lee, Shiou Yih
Hu, Xing
Wang, Wei
Zhang, Jifang
Ruan, Lin
Dai, Seping
Liu, Guofeng
The complete chloroplast genome of a commercially exploited ornamental plant, Bougainvillea glabra (Caryophyllales: Nyctaginaceae)
title The complete chloroplast genome of a commercially exploited ornamental plant, Bougainvillea glabra (Caryophyllales: Nyctaginaceae)
title_full The complete chloroplast genome of a commercially exploited ornamental plant, Bougainvillea glabra (Caryophyllales: Nyctaginaceae)
title_fullStr The complete chloroplast genome of a commercially exploited ornamental plant, Bougainvillea glabra (Caryophyllales: Nyctaginaceae)
title_full_unstemmed The complete chloroplast genome of a commercially exploited ornamental plant, Bougainvillea glabra (Caryophyllales: Nyctaginaceae)
title_short The complete chloroplast genome of a commercially exploited ornamental plant, Bougainvillea glabra (Caryophyllales: Nyctaginaceae)
title_sort complete chloroplast genome of a commercially exploited ornamental plant, bougainvillea glabra (caryophyllales: nyctaginaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707241/
https://www.ncbi.nlm.nih.gov/pubmed/33366007
http://dx.doi.org/10.1080/23802359.2019.1674721
work_keys_str_mv AT nijianzhong thecompletechloroplastgenomeofacommerciallyexploitedornamentalplantbougainvilleaglabracaryophyllalesnyctaginaceae
AT leeshiouyih thecompletechloroplastgenomeofacommerciallyexploitedornamentalplantbougainvilleaglabracaryophyllalesnyctaginaceae
AT huxing thecompletechloroplastgenomeofacommerciallyexploitedornamentalplantbougainvilleaglabracaryophyllalesnyctaginaceae
AT wangwei thecompletechloroplastgenomeofacommerciallyexploitedornamentalplantbougainvilleaglabracaryophyllalesnyctaginaceae
AT zhangjifang thecompletechloroplastgenomeofacommerciallyexploitedornamentalplantbougainvilleaglabracaryophyllalesnyctaginaceae
AT ruanlin thecompletechloroplastgenomeofacommerciallyexploitedornamentalplantbougainvilleaglabracaryophyllalesnyctaginaceae
AT daiseping thecompletechloroplastgenomeofacommerciallyexploitedornamentalplantbougainvilleaglabracaryophyllalesnyctaginaceae
AT liuguofeng thecompletechloroplastgenomeofacommerciallyexploitedornamentalplantbougainvilleaglabracaryophyllalesnyctaginaceae
AT nijianzhong completechloroplastgenomeofacommerciallyexploitedornamentalplantbougainvilleaglabracaryophyllalesnyctaginaceae
AT leeshiouyih completechloroplastgenomeofacommerciallyexploitedornamentalplantbougainvilleaglabracaryophyllalesnyctaginaceae
AT huxing completechloroplastgenomeofacommerciallyexploitedornamentalplantbougainvilleaglabracaryophyllalesnyctaginaceae
AT wangwei completechloroplastgenomeofacommerciallyexploitedornamentalplantbougainvilleaglabracaryophyllalesnyctaginaceae
AT zhangjifang completechloroplastgenomeofacommerciallyexploitedornamentalplantbougainvilleaglabracaryophyllalesnyctaginaceae
AT ruanlin completechloroplastgenomeofacommerciallyexploitedornamentalplantbougainvilleaglabracaryophyllalesnyctaginaceae
AT daiseping completechloroplastgenomeofacommerciallyexploitedornamentalplantbougainvilleaglabracaryophyllalesnyctaginaceae
AT liuguofeng completechloroplastgenomeofacommerciallyexploitedornamentalplantbougainvilleaglabracaryophyllalesnyctaginaceae

Ejemplares similares