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Complete chloroplast genome of Achyranthes bidentata Blume
Achyranthes bidentata Blume is an important herbal medicine. However, little genetic information about Achyranthes is available. To facilitate species identification, we sequenced its complete chloroplast genome using the Illumina MiSeq platform. The data show that the chloroplast genome of A. biden...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707250/ https://www.ncbi.nlm.nih.gov/pubmed/33366037 http://dx.doi.org/10.1080/23802359.2019.1674219 |
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author | Park, Inkyu Yang, Sungyu Kim, Wook Jin Moon, Byeong Cheol |
author_facet | Park, Inkyu Yang, Sungyu Kim, Wook Jin Moon, Byeong Cheol |
author_sort | Park, Inkyu |
collection | PubMed |
description | Achyranthes bidentata Blume is an important herbal medicine. However, little genetic information about Achyranthes is available. To facilitate species identification, we sequenced its complete chloroplast genome using the Illumina MiSeq platform. The data show that the chloroplast genome of A. bidentata is 151,441 bp in size and comprises an 83,890 bp large single-copy region, a 17,261 bp small single-copy region, and two inverted repeat (IR) regions, IRa and IRb (each 25,145 bp). The genome contains 112 unique genes, including 79 protein-coding genes, 4 ribosomal RNAs genes, and 30 transfer RNAs genes. Phylogenetic analysis revealed that A. bidentata is most closely related to Alternanthera philoxeroides. |
format | Online Article Text |
id | pubmed-7707250 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77072502020-12-22 Complete chloroplast genome of Achyranthes bidentata Blume Park, Inkyu Yang, Sungyu Kim, Wook Jin Moon, Byeong Cheol Mitochondrial DNA B Resour Mitogenome Announcement Achyranthes bidentata Blume is an important herbal medicine. However, little genetic information about Achyranthes is available. To facilitate species identification, we sequenced its complete chloroplast genome using the Illumina MiSeq platform. The data show that the chloroplast genome of A. bidentata is 151,441 bp in size and comprises an 83,890 bp large single-copy region, a 17,261 bp small single-copy region, and two inverted repeat (IR) regions, IRa and IRb (each 25,145 bp). The genome contains 112 unique genes, including 79 protein-coding genes, 4 ribosomal RNAs genes, and 30 transfer RNAs genes. Phylogenetic analysis revealed that A. bidentata is most closely related to Alternanthera philoxeroides. Taylor & Francis 2019-10-09 /pmc/articles/PMC7707250/ /pubmed/33366037 http://dx.doi.org/10.1080/23802359.2019.1674219 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Park, Inkyu Yang, Sungyu Kim, Wook Jin Moon, Byeong Cheol Complete chloroplast genome of Achyranthes bidentata Blume |
title | Complete chloroplast genome of Achyranthes bidentata Blume |
title_full | Complete chloroplast genome of Achyranthes bidentata Blume |
title_fullStr | Complete chloroplast genome of Achyranthes bidentata Blume |
title_full_unstemmed | Complete chloroplast genome of Achyranthes bidentata Blume |
title_short | Complete chloroplast genome of Achyranthes bidentata Blume |
title_sort | complete chloroplast genome of achyranthes bidentata blume |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707250/ https://www.ncbi.nlm.nih.gov/pubmed/33366037 http://dx.doi.org/10.1080/23802359.2019.1674219 |
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