Characterization of the complete chloroplast genome of medicinal tea tree (Melaleuca alternifolia)

Melaleuca alternifolia is commonly known as the medicinal tea tree. The complete chloroplast (cp) genome sequence is 160,104 bp in length, with a quantitative molecule structure comprising two copies of inverted repeats (IRa and IRb) of 26,737 bp separated by a large single copy (LSC) of 88,151bp, a...

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Autores principales: Liu, Hailong, Geng, Maolin, Qin, Yufeng, Xiao, Yufei, Li, Mimi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707254/
https://www.ncbi.nlm.nih.gov/pubmed/33365968
http://dx.doi.org/10.1080/23802359.2019.1673246
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author Liu, Hailong
Geng, Maolin
Qin, Yufeng
Xiao, Yufei
Li, Mimi
author_facet Liu, Hailong
Geng, Maolin
Qin, Yufeng
Xiao, Yufei
Li, Mimi
author_sort Liu, Hailong
collection PubMed
description Melaleuca alternifolia is commonly known as the medicinal tea tree. The complete chloroplast (cp) genome sequence is 160,104 bp in length, with a quantitative molecule structure comprising two copies of inverted repeats (IRa and IRb) of 26,737 bp separated by a large single copy (LSC) of 88,151bp, a small single copy (SSC) of 18,479 bp. A total of 131 genes were identified including 84 protein-coding genes, 37 tRNA genes, eight rRNA genes and two pseudogene (Ψycf1, ΨinfA), respectively. Phylogenomic analysis suggests that M. alternifolia is closely related to the rest species of Myrtaceae with strong bootstrap values.
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spelling pubmed-77072542020-12-22 Characterization of the complete chloroplast genome of medicinal tea tree (Melaleuca alternifolia) Liu, Hailong Geng, Maolin Qin, Yufeng Xiao, Yufei Li, Mimi Mitochondrial DNA B Resour Mitogenome Announcement Melaleuca alternifolia is commonly known as the medicinal tea tree. The complete chloroplast (cp) genome sequence is 160,104 bp in length, with a quantitative molecule structure comprising two copies of inverted repeats (IRa and IRb) of 26,737 bp separated by a large single copy (LSC) of 88,151bp, a small single copy (SSC) of 18,479 bp. A total of 131 genes were identified including 84 protein-coding genes, 37 tRNA genes, eight rRNA genes and two pseudogene (Ψycf1, ΨinfA), respectively. Phylogenomic analysis suggests that M. alternifolia is closely related to the rest species of Myrtaceae with strong bootstrap values. Taylor & Francis 2019-10-01 /pmc/articles/PMC7707254/ /pubmed/33365968 http://dx.doi.org/10.1080/23802359.2019.1673246 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Liu, Hailong
Geng, Maolin
Qin, Yufeng
Xiao, Yufei
Li, Mimi
Characterization of the complete chloroplast genome of medicinal tea tree (Melaleuca alternifolia)
title Characterization of the complete chloroplast genome of medicinal tea tree (Melaleuca alternifolia)
title_full Characterization of the complete chloroplast genome of medicinal tea tree (Melaleuca alternifolia)
title_fullStr Characterization of the complete chloroplast genome of medicinal tea tree (Melaleuca alternifolia)
title_full_unstemmed Characterization of the complete chloroplast genome of medicinal tea tree (Melaleuca alternifolia)
title_short Characterization of the complete chloroplast genome of medicinal tea tree (Melaleuca alternifolia)
title_sort characterization of the complete chloroplast genome of medicinal tea tree (melaleuca alternifolia)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707254/
https://www.ncbi.nlm.nih.gov/pubmed/33365968
http://dx.doi.org/10.1080/23802359.2019.1673246
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