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The complete mitochondrial genome of a stonefly species, Indonemoura auriformis (Plecoptera: Nemouridae)

One new mitochondrial genome of Indonemoura auriformis from the family Nemouridae (Insecta: Plecoptera) was sequenced in the study. The mitochondrial genome has the length of 15,718 bp, encoding 37 genes: 13 protein-coding genes (PCGs), 22 transfer RNA (tRNA) genes, and 2 ribosomal RNA (rRNA) genes....

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Autores principales: Chen, Mengdan, Wang, Ying, Chen, Jiajia, Cao, Jinjun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707255/
https://www.ncbi.nlm.nih.gov/pubmed/33366008
http://dx.doi.org/10.1080/23802359.2019.1674723
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author Chen, Mengdan
Wang, Ying
Chen, Jiajia
Cao, Jinjun
author_facet Chen, Mengdan
Wang, Ying
Chen, Jiajia
Cao, Jinjun
author_sort Chen, Mengdan
collection PubMed
description One new mitochondrial genome of Indonemoura auriformis from the family Nemouridae (Insecta: Plecoptera) was sequenced in the study. The mitochondrial genome has the length of 15,718 bp, encoding 37 genes: 13 protein-coding genes (PCGs), 22 transfer RNA (tRNA) genes, and 2 ribosomal RNA (rRNA) genes. The whole nucleotide composition biased adenine and thymine with A + T accounting for 69.9%. Nine PCGs and 14 tRNA genes are encoded in the J chain, the other four PCGs, eight tRNAs, and two rRNA genes are encoded in the chain of N. The mitochondrial genome includes 13 gene overlaps and 12 intergenic spacers. Most PCGs strictly use the ATN as start codon, and terminate with traditional stop codon (TAA and TAG). Except the tRNA(Ser(AGN)) seems to lack dihydrogen glycine arm, all tRNA genes of the mitochondrial genome are the typical clover secondary structure. The phylogenetic tree of PCGs dataset based on bayesian inference (BI) and maximum likelihood (ML) analysis show the same tree topology. Both ML and BI analysis support the sister-group relationship between Amphinemuria and Nemoura. Meanwhile, Capniidae is closely related to Taeniopterygidae.
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spelling pubmed-77072552020-12-22 The complete mitochondrial genome of a stonefly species, Indonemoura auriformis (Plecoptera: Nemouridae) Chen, Mengdan Wang, Ying Chen, Jiajia Cao, Jinjun Mitochondrial DNA B Resour Mitogenome Announcement One new mitochondrial genome of Indonemoura auriformis from the family Nemouridae (Insecta: Plecoptera) was sequenced in the study. The mitochondrial genome has the length of 15,718 bp, encoding 37 genes: 13 protein-coding genes (PCGs), 22 transfer RNA (tRNA) genes, and 2 ribosomal RNA (rRNA) genes. The whole nucleotide composition biased adenine and thymine with A + T accounting for 69.9%. Nine PCGs and 14 tRNA genes are encoded in the J chain, the other four PCGs, eight tRNAs, and two rRNA genes are encoded in the chain of N. The mitochondrial genome includes 13 gene overlaps and 12 intergenic spacers. Most PCGs strictly use the ATN as start codon, and terminate with traditional stop codon (TAA and TAG). Except the tRNA(Ser(AGN)) seems to lack dihydrogen glycine arm, all tRNA genes of the mitochondrial genome are the typical clover secondary structure. The phylogenetic tree of PCGs dataset based on bayesian inference (BI) and maximum likelihood (ML) analysis show the same tree topology. Both ML and BI analysis support the sister-group relationship between Amphinemuria and Nemoura. Meanwhile, Capniidae is closely related to Taeniopterygidae. Taylor & Francis 2019-10-07 /pmc/articles/PMC7707255/ /pubmed/33366008 http://dx.doi.org/10.1080/23802359.2019.1674723 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by-nc/4.0/
spellingShingle Mitogenome Announcement
Chen, Mengdan
Wang, Ying
Chen, Jiajia
Cao, Jinjun
The complete mitochondrial genome of a stonefly species, Indonemoura auriformis (Plecoptera: Nemouridae)
title The complete mitochondrial genome of a stonefly species, Indonemoura auriformis (Plecoptera: Nemouridae)
title_full The complete mitochondrial genome of a stonefly species, Indonemoura auriformis (Plecoptera: Nemouridae)
title_fullStr The complete mitochondrial genome of a stonefly species, Indonemoura auriformis (Plecoptera: Nemouridae)
title_full_unstemmed The complete mitochondrial genome of a stonefly species, Indonemoura auriformis (Plecoptera: Nemouridae)
title_short The complete mitochondrial genome of a stonefly species, Indonemoura auriformis (Plecoptera: Nemouridae)
title_sort complete mitochondrial genome of a stonefly species, indonemoura auriformis (plecoptera: nemouridae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707255/
https://www.ncbi.nlm.nih.gov/pubmed/33366008
http://dx.doi.org/10.1080/23802359.2019.1674723
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