The complete chloroplast genome sequence of Oberonia seidenfadenii (Orchidaceae), a rare plant species endemic to China

Oberonia seidenfadenii is a rare and newly recorded plant species in Zhejiang province, China. In our present study, the complete chloroplast (cp) genome sequence of O. seidenfadenii was assembled by using high-throughput Illumina sequencing data. The plastome is 143,062 bp in size, which contains a...

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Detalles Bibliográficos
Autores principales: Jiang, Ming, Wang, Junfeng, Chen, Minghui
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707268/
https://www.ncbi.nlm.nih.gov/pubmed/33365994
http://dx.doi.org/10.1080/23802359.2019.1674209
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author Jiang, Ming
Wang, Junfeng
Chen, Minghui
author_facet Jiang, Ming
Wang, Junfeng
Chen, Minghui
author_sort Jiang, Ming
collection PubMed
description Oberonia seidenfadenii is a rare and newly recorded plant species in Zhejiang province, China. In our present study, the complete chloroplast (cp) genome sequence of O. seidenfadenii was assembled by using high-throughput Illumina sequencing data. The plastome is 143,062 bp in size, which contains a typical quadripartite structure with a pair of inverted repeats (IR) regions (24,278 bp) separated by a small single-copy (SSC) region (10,224 bp) and a large single-copy (LSC) region (84,282 bp). The cp genome sequence contains 127 genes, including 74 protein-coding genes, 38 tRNA genes, 8 rRNA genes, and 7 pseudogenes. Phylogenetic analysis results indicated O. seidenfadenii is a sister of Oberonia japonica, with a support rate of 100%.
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spelling pubmed-77072682020-12-22 The complete chloroplast genome sequence of Oberonia seidenfadenii (Orchidaceae), a rare plant species endemic to China Jiang, Ming Wang, Junfeng Chen, Minghui Mitochondrial DNA B Resour Mitogenome Announcement Oberonia seidenfadenii is a rare and newly recorded plant species in Zhejiang province, China. In our present study, the complete chloroplast (cp) genome sequence of O. seidenfadenii was assembled by using high-throughput Illumina sequencing data. The plastome is 143,062 bp in size, which contains a typical quadripartite structure with a pair of inverted repeats (IR) regions (24,278 bp) separated by a small single-copy (SSC) region (10,224 bp) and a large single-copy (LSC) region (84,282 bp). The cp genome sequence contains 127 genes, including 74 protein-coding genes, 38 tRNA genes, 8 rRNA genes, and 7 pseudogenes. Phylogenetic analysis results indicated O. seidenfadenii is a sister of Oberonia japonica, with a support rate of 100%. Taylor & Francis 2019-10-04 /pmc/articles/PMC7707268/ /pubmed/33365994 http://dx.doi.org/10.1080/23802359.2019.1674209 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Jiang, Ming
Wang, Junfeng
Chen, Minghui
The complete chloroplast genome sequence of Oberonia seidenfadenii (Orchidaceae), a rare plant species endemic to China
title The complete chloroplast genome sequence of Oberonia seidenfadenii (Orchidaceae), a rare plant species endemic to China
title_full The complete chloroplast genome sequence of Oberonia seidenfadenii (Orchidaceae), a rare plant species endemic to China
title_fullStr The complete chloroplast genome sequence of Oberonia seidenfadenii (Orchidaceae), a rare plant species endemic to China
title_full_unstemmed The complete chloroplast genome sequence of Oberonia seidenfadenii (Orchidaceae), a rare plant species endemic to China
title_short The complete chloroplast genome sequence of Oberonia seidenfadenii (Orchidaceae), a rare plant species endemic to China
title_sort complete chloroplast genome sequence of oberonia seidenfadenii (orchidaceae), a rare plant species endemic to china
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707268/
https://www.ncbi.nlm.nih.gov/pubmed/33365994
http://dx.doi.org/10.1080/23802359.2019.1674209
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