The complete chloroplast genome sequence of Rosa laevigata (Rosaceae)

The complete chloroplast genome of Rosa laevigata has been characterized by reference-based assembly using Illumina paired-end data. The complete cp genome is 156,342 bp in length, containing a large single-copy region of 85,459 bp, a small single-copy region of 18,785 bp, which are separated by a p...

Descripción completa

Detalles Bibliográficos
Autores principales: Zhang, Cheng, Xiong, Xianhua, Gao, Xinfen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707283/
https://www.ncbi.nlm.nih.gov/pubmed/33366083
http://dx.doi.org/10.1080/23802359.2019.1674200
_version_ 1783617311960203264
author Zhang, Cheng
Xiong, Xianhua
Gao, Xinfen
author_facet Zhang, Cheng
Xiong, Xianhua
Gao, Xinfen
author_sort Zhang, Cheng
collection PubMed
description The complete chloroplast genome of Rosa laevigata has been characterized by reference-based assembly using Illumina paired-end data. The complete cp genome is 156,342 bp in length, containing a large single-copy region of 85,459 bp, a small single-copy region of 18,785 bp, which are separated by a pair of inverted repeat regions of 26,049 bp, a total of 140 genes were predicted from the cp genome, including 87 protein-coding genes, 39 tRNA genes, and 8 rRNA genes . Most genes occur as a single copy, while 19 gene species are duplicated. Phylogenetic analysis reveals that R. laevigata and Rosa roxburghii f. normalis are more closely related to each other than either is to Rosa banksiae var. normalis.
format Online
Article
Text
id pubmed-7707283
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-77072832020-12-22 The complete chloroplast genome sequence of Rosa laevigata (Rosaceae) Zhang, Cheng Xiong, Xianhua Gao, Xinfen Mitochondrial DNA B Resour Mitogenome Announcement The complete chloroplast genome of Rosa laevigata has been characterized by reference-based assembly using Illumina paired-end data. The complete cp genome is 156,342 bp in length, containing a large single-copy region of 85,459 bp, a small single-copy region of 18,785 bp, which are separated by a pair of inverted repeat regions of 26,049 bp, a total of 140 genes were predicted from the cp genome, including 87 protein-coding genes, 39 tRNA genes, and 8 rRNA genes . Most genes occur as a single copy, while 19 gene species are duplicated. Phylogenetic analysis reveals that R. laevigata and Rosa roxburghii f. normalis are more closely related to each other than either is to Rosa banksiae var. normalis. Taylor & Francis 2019-10-15 /pmc/articles/PMC7707283/ /pubmed/33366083 http://dx.doi.org/10.1080/23802359.2019.1674200 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Zhang, Cheng
Xiong, Xianhua
Gao, Xinfen
The complete chloroplast genome sequence of Rosa laevigata (Rosaceae)
title The complete chloroplast genome sequence of Rosa laevigata (Rosaceae)
title_full The complete chloroplast genome sequence of Rosa laevigata (Rosaceae)
title_fullStr The complete chloroplast genome sequence of Rosa laevigata (Rosaceae)
title_full_unstemmed The complete chloroplast genome sequence of Rosa laevigata (Rosaceae)
title_short The complete chloroplast genome sequence of Rosa laevigata (Rosaceae)
title_sort complete chloroplast genome sequence of rosa laevigata (rosaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707283/
https://www.ncbi.nlm.nih.gov/pubmed/33366083
http://dx.doi.org/10.1080/23802359.2019.1674200
work_keys_str_mv AT zhangcheng thecompletechloroplastgenomesequenceofrosalaevigatarosaceae
AT xiongxianhua thecompletechloroplastgenomesequenceofrosalaevigatarosaceae
AT gaoxinfen thecompletechloroplastgenomesequenceofrosalaevigatarosaceae
AT zhangcheng completechloroplastgenomesequenceofrosalaevigatarosaceae
AT xiongxianhua completechloroplastgenomesequenceofrosalaevigatarosaceae
AT gaoxinfen completechloroplastgenomesequenceofrosalaevigatarosaceae

Ejemplares similares