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Characterisation of the complete mitochondrial genome of Lucanus chengyuani (Coleoptera: Lucanidae)

We sequenced and assembled the complete mitochondrial genome of Lucanus chengyuani, from the Alishan, Chiayi County, Taiwan. The length of the complete mitogenome of L. chengyuani is 16,926 bp and the mitogenome contains 13 protein-coding, 22 tRNA, and 2 rDNA genes. Nucleotide compositions of the wh...

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Autores principales: Wang, Liang-Jong, Huang, Jen-Pan, Shiao, Shiuh-Feng, Ko, Hsin-Ping, Sung, Chia-Hsuan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707321/
https://www.ncbi.nlm.nih.gov/pubmed/33366039
http://dx.doi.org/10.1080/23802359.2019.1674703
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author Wang, Liang-Jong
Huang, Jen-Pan
Shiao, Shiuh-Feng
Ko, Hsin-Ping
Sung, Chia-Hsuan
author_facet Wang, Liang-Jong
Huang, Jen-Pan
Shiao, Shiuh-Feng
Ko, Hsin-Ping
Sung, Chia-Hsuan
author_sort Wang, Liang-Jong
collection PubMed
description We sequenced and assembled the complete mitochondrial genome of Lucanus chengyuani, from the Alishan, Chiayi County, Taiwan. The length of the complete mitogenome of L. chengyuani is 16,926 bp and the mitogenome contains 13 protein-coding, 22 tRNA, and 2 rDNA genes. Nucleotide compositions of the whole mitogenome of L. chengyuani are 38.37% for A, 27.96% for T, 23.03% for C, and 10.637% for G. The AT and GC skewness of mitogenome sequence are 0.157 and -0.368, showing the A-skew and C-skew. The reconstructed phylogenetic relationships of 9 Lucanidae species based on 13 mitochondrial protein-coding genes are highly supported. The clade including Neolucanus maximus and Odontolabis cuvera is sister to the rest of the stag beetle clades, which contains L. chengyuani and L. mazama. Mitogenomic data from this study will provide useful information for further studies for the population genetics, speciation, biogeography, and conservation of L. chengyuani in the future.
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spelling pubmed-77073212020-12-22 Characterisation of the complete mitochondrial genome of Lucanus chengyuani (Coleoptera: Lucanidae) Wang, Liang-Jong Huang, Jen-Pan Shiao, Shiuh-Feng Ko, Hsin-Ping Sung, Chia-Hsuan Mitochondrial DNA B Resour Mitogenome Announcement We sequenced and assembled the complete mitochondrial genome of Lucanus chengyuani, from the Alishan, Chiayi County, Taiwan. The length of the complete mitogenome of L. chengyuani is 16,926 bp and the mitogenome contains 13 protein-coding, 22 tRNA, and 2 rDNA genes. Nucleotide compositions of the whole mitogenome of L. chengyuani are 38.37% for A, 27.96% for T, 23.03% for C, and 10.637% for G. The AT and GC skewness of mitogenome sequence are 0.157 and -0.368, showing the A-skew and C-skew. The reconstructed phylogenetic relationships of 9 Lucanidae species based on 13 mitochondrial protein-coding genes are highly supported. The clade including Neolucanus maximus and Odontolabis cuvera is sister to the rest of the stag beetle clades, which contains L. chengyuani and L. mazama. Mitogenomic data from this study will provide useful information for further studies for the population genetics, speciation, biogeography, and conservation of L. chengyuani in the future. Taylor & Francis 2019-10-12 /pmc/articles/PMC7707321/ /pubmed/33366039 http://dx.doi.org/10.1080/23802359.2019.1674703 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Wang, Liang-Jong
Huang, Jen-Pan
Shiao, Shiuh-Feng
Ko, Hsin-Ping
Sung, Chia-Hsuan
Characterisation of the complete mitochondrial genome of Lucanus chengyuani (Coleoptera: Lucanidae)
title Characterisation of the complete mitochondrial genome of Lucanus chengyuani (Coleoptera: Lucanidae)
title_full Characterisation of the complete mitochondrial genome of Lucanus chengyuani (Coleoptera: Lucanidae)
title_fullStr Characterisation of the complete mitochondrial genome of Lucanus chengyuani (Coleoptera: Lucanidae)
title_full_unstemmed Characterisation of the complete mitochondrial genome of Lucanus chengyuani (Coleoptera: Lucanidae)
title_short Characterisation of the complete mitochondrial genome of Lucanus chengyuani (Coleoptera: Lucanidae)
title_sort characterisation of the complete mitochondrial genome of lucanus chengyuani (coleoptera: lucanidae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707321/
https://www.ncbi.nlm.nih.gov/pubmed/33366039
http://dx.doi.org/10.1080/23802359.2019.1674703
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