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Characterisation of the complete mitochondrial genome of Lucanus chengyuani (Coleoptera: Lucanidae)
We sequenced and assembled the complete mitochondrial genome of Lucanus chengyuani, from the Alishan, Chiayi County, Taiwan. The length of the complete mitogenome of L. chengyuani is 16,926 bp and the mitogenome contains 13 protein-coding, 22 tRNA, and 2 rDNA genes. Nucleotide compositions of the wh...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707321/ https://www.ncbi.nlm.nih.gov/pubmed/33366039 http://dx.doi.org/10.1080/23802359.2019.1674703 |
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author | Wang, Liang-Jong Huang, Jen-Pan Shiao, Shiuh-Feng Ko, Hsin-Ping Sung, Chia-Hsuan |
author_facet | Wang, Liang-Jong Huang, Jen-Pan Shiao, Shiuh-Feng Ko, Hsin-Ping Sung, Chia-Hsuan |
author_sort | Wang, Liang-Jong |
collection | PubMed |
description | We sequenced and assembled the complete mitochondrial genome of Lucanus chengyuani, from the Alishan, Chiayi County, Taiwan. The length of the complete mitogenome of L. chengyuani is 16,926 bp and the mitogenome contains 13 protein-coding, 22 tRNA, and 2 rDNA genes. Nucleotide compositions of the whole mitogenome of L. chengyuani are 38.37% for A, 27.96% for T, 23.03% for C, and 10.637% for G. The AT and GC skewness of mitogenome sequence are 0.157 and -0.368, showing the A-skew and C-skew. The reconstructed phylogenetic relationships of 9 Lucanidae species based on 13 mitochondrial protein-coding genes are highly supported. The clade including Neolucanus maximus and Odontolabis cuvera is sister to the rest of the stag beetle clades, which contains L. chengyuani and L. mazama. Mitogenomic data from this study will provide useful information for further studies for the population genetics, speciation, biogeography, and conservation of L. chengyuani in the future. |
format | Online Article Text |
id | pubmed-7707321 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77073212020-12-22 Characterisation of the complete mitochondrial genome of Lucanus chengyuani (Coleoptera: Lucanidae) Wang, Liang-Jong Huang, Jen-Pan Shiao, Shiuh-Feng Ko, Hsin-Ping Sung, Chia-Hsuan Mitochondrial DNA B Resour Mitogenome Announcement We sequenced and assembled the complete mitochondrial genome of Lucanus chengyuani, from the Alishan, Chiayi County, Taiwan. The length of the complete mitogenome of L. chengyuani is 16,926 bp and the mitogenome contains 13 protein-coding, 22 tRNA, and 2 rDNA genes. Nucleotide compositions of the whole mitogenome of L. chengyuani are 38.37% for A, 27.96% for T, 23.03% for C, and 10.637% for G. The AT and GC skewness of mitogenome sequence are 0.157 and -0.368, showing the A-skew and C-skew. The reconstructed phylogenetic relationships of 9 Lucanidae species based on 13 mitochondrial protein-coding genes are highly supported. The clade including Neolucanus maximus and Odontolabis cuvera is sister to the rest of the stag beetle clades, which contains L. chengyuani and L. mazama. Mitogenomic data from this study will provide useful information for further studies for the population genetics, speciation, biogeography, and conservation of L. chengyuani in the future. Taylor & Francis 2019-10-12 /pmc/articles/PMC7707321/ /pubmed/33366039 http://dx.doi.org/10.1080/23802359.2019.1674703 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Wang, Liang-Jong Huang, Jen-Pan Shiao, Shiuh-Feng Ko, Hsin-Ping Sung, Chia-Hsuan Characterisation of the complete mitochondrial genome of Lucanus chengyuani (Coleoptera: Lucanidae) |
title | Characterisation of the complete mitochondrial genome of Lucanus chengyuani (Coleoptera: Lucanidae) |
title_full | Characterisation of the complete mitochondrial genome of Lucanus chengyuani (Coleoptera: Lucanidae) |
title_fullStr | Characterisation of the complete mitochondrial genome of Lucanus chengyuani (Coleoptera: Lucanidae) |
title_full_unstemmed | Characterisation of the complete mitochondrial genome of Lucanus chengyuani (Coleoptera: Lucanidae) |
title_short | Characterisation of the complete mitochondrial genome of Lucanus chengyuani (Coleoptera: Lucanidae) |
title_sort | characterisation of the complete mitochondrial genome of lucanus chengyuani (coleoptera: lucanidae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707321/ https://www.ncbi.nlm.nih.gov/pubmed/33366039 http://dx.doi.org/10.1080/23802359.2019.1674703 |
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