Cargando…

Complete plastid genome of Dendrobium naungmungense (Orchidaceae)

Dendrobium is one of the most important genera in Orchidaceae. In this study, we used the next-generation sequencing technology and assembled a complete plastid genome of a recently published new species of Dendrobium, D. naungmungense. The plastome was 151,883 bp in length, containing a large singl...

Descripción completa

Detalles Bibliográficos
Autores principales: Wang, Min-Hua, Ma, Liang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707356/
https://www.ncbi.nlm.nih.gov/pubmed/33366022
http://dx.doi.org/10.1080/23802359.2019.1674736
_version_ 1783617328980688896
author Wang, Min-Hua
Ma, Liang
author_facet Wang, Min-Hua
Ma, Liang
author_sort Wang, Min-Hua
collection PubMed
description Dendrobium is one of the most important genera in Orchidaceae. In this study, we used the next-generation sequencing technology and assembled a complete plastid genome of a recently published new species of Dendrobium, D. naungmungense. The plastome was 151,883 bp in length, containing a large single-copy region (LSC) of 87,189 bp, and a small single-copy region (SSC) of 12,150 bp, and two inverted repeat regions (IR) of 26,272 bp. A total of 123 genes were predicted, including 38 tRNA genes, 8 rRNA genes, and 77 protein-coding genes. Phylogenetic analysis of 44 representative plastome of the genus Dendrobium and outgroup suggested D. naungmungense to be sister to Dendrobium wardianum.
format Online
Article
Text
id pubmed-7707356
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-77073562020-12-22 Complete plastid genome of Dendrobium naungmungense (Orchidaceae) Wang, Min-Hua Ma, Liang Mitochondrial DNA B Resour Mitogenome Announcement Dendrobium is one of the most important genera in Orchidaceae. In this study, we used the next-generation sequencing technology and assembled a complete plastid genome of a recently published new species of Dendrobium, D. naungmungense. The plastome was 151,883 bp in length, containing a large single-copy region (LSC) of 87,189 bp, and a small single-copy region (SSC) of 12,150 bp, and two inverted repeat regions (IR) of 26,272 bp. A total of 123 genes were predicted, including 38 tRNA genes, 8 rRNA genes, and 77 protein-coding genes. Phylogenetic analysis of 44 representative plastome of the genus Dendrobium and outgroup suggested D. naungmungense to be sister to Dendrobium wardianum. Taylor & Francis 2019-10-09 /pmc/articles/PMC7707356/ /pubmed/33366022 http://dx.doi.org/10.1080/23802359.2019.1674736 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Wang, Min-Hua
Ma, Liang
Complete plastid genome of Dendrobium naungmungense (Orchidaceae)
title Complete plastid genome of Dendrobium naungmungense (Orchidaceae)
title_full Complete plastid genome of Dendrobium naungmungense (Orchidaceae)
title_fullStr Complete plastid genome of Dendrobium naungmungense (Orchidaceae)
title_full_unstemmed Complete plastid genome of Dendrobium naungmungense (Orchidaceae)
title_short Complete plastid genome of Dendrobium naungmungense (Orchidaceae)
title_sort complete plastid genome of dendrobium naungmungense (orchidaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707356/
https://www.ncbi.nlm.nih.gov/pubmed/33366022
http://dx.doi.org/10.1080/23802359.2019.1674736
work_keys_str_mv AT wangminhua completeplastidgenomeofdendrobiumnaungmungenseorchidaceae
AT maliang completeplastidgenomeofdendrobiumnaungmungenseorchidaceae