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The complete chloroplast genome sequence of Canarium album
The first complete chloroplast genome (cpDNA) sequence of Canarium album was determined from Illumina HiSeq pair-end sequencing data in this study. The cpDNA is 163,347 bp in length, contains a large single-copy (LSC) region of 87,838 bp and a small single-copy (SSC) region of 13,935 bp, which were...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707361/ https://www.ncbi.nlm.nih.gov/pubmed/33366044 http://dx.doi.org/10.1080/23802359.2019.1674711 |
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author | Wang, Yi Hao, Jiabo Lu, Bin |
author_facet | Wang, Yi Hao, Jiabo Lu, Bin |
author_sort | Wang, Yi |
collection | PubMed |
description | The first complete chloroplast genome (cpDNA) sequence of Canarium album was determined from Illumina HiSeq pair-end sequencing data in this study. The cpDNA is 163,347 bp in length, contains a large single-copy (LSC) region of 87,838 bp and a small single-copy (SSC) region of 13,935 bp, which were separated by a pair of inverted repeats (IRs) regions of 30,787 bp. The genome contains 129 genes, including 84 protein-coding genes, 8 ribosomal RNA genes, and 37 transfer RNA genes. The overall guanine-cytosine (GC) content of the whole genome is 37.5%, and the corresponding values of the LSC, SSC, and IR regions are 35.8%, 32.6%, and 41.1%, respectively. Further, phylogenomic analysis showed that C. album clustered together with Boswellia sacra. |
format | Online Article Text |
id | pubmed-7707361 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77073612020-12-22 The complete chloroplast genome sequence of Canarium album Wang, Yi Hao, Jiabo Lu, Bin Mitochondrial DNA B Resour Mitogenome Announcement The first complete chloroplast genome (cpDNA) sequence of Canarium album was determined from Illumina HiSeq pair-end sequencing data in this study. The cpDNA is 163,347 bp in length, contains a large single-copy (LSC) region of 87,838 bp and a small single-copy (SSC) region of 13,935 bp, which were separated by a pair of inverted repeats (IRs) regions of 30,787 bp. The genome contains 129 genes, including 84 protein-coding genes, 8 ribosomal RNA genes, and 37 transfer RNA genes. The overall guanine-cytosine (GC) content of the whole genome is 37.5%, and the corresponding values of the LSC, SSC, and IR regions are 35.8%, 32.6%, and 41.1%, respectively. Further, phylogenomic analysis showed that C. album clustered together with Boswellia sacra. Taylor & Francis 2019-10-11 /pmc/articles/PMC7707361/ /pubmed/33366044 http://dx.doi.org/10.1080/23802359.2019.1674711 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Wang, Yi Hao, Jiabo Lu, Bin The complete chloroplast genome sequence of Canarium album |
title | The complete chloroplast genome sequence of Canarium album |
title_full | The complete chloroplast genome sequence of Canarium album |
title_fullStr | The complete chloroplast genome sequence of Canarium album |
title_full_unstemmed | The complete chloroplast genome sequence of Canarium album |
title_short | The complete chloroplast genome sequence of Canarium album |
title_sort | complete chloroplast genome sequence of canarium album |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707361/ https://www.ncbi.nlm.nih.gov/pubmed/33366044 http://dx.doi.org/10.1080/23802359.2019.1674711 |
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