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The complete chloroplast genome sequence of Celtis tetrandra
The first complete chloroplast genome sequences of Celtis tetrandra were reported in this study. The cpDNA of C. tetrandra is 159,014 bp in length, contains a large single-copy region (LSC) of 86,097 bp, and a small single-copy region (SSC) of 19,129 bp, which were separated by a pair of inverted re...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707362/ https://www.ncbi.nlm.nih.gov/pubmed/33366040 http://dx.doi.org/10.1080/23802359.2019.1674705 |
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author | Wang, Yi Yuan, Xiaolong Zhang, Jinfeng |
author_facet | Wang, Yi Yuan, Xiaolong Zhang, Jinfeng |
author_sort | Wang, Yi |
collection | PubMed |
description | The first complete chloroplast genome sequences of Celtis tetrandra were reported in this study. The cpDNA of C. tetrandra is 159,014 bp in length, contains a large single-copy region (LSC) of 86,097 bp, and a small single-copy region (SSC) of 19,129 bp, which were separated by a pair of inverted repeat (IR) regions of 26,894 bp. The genome contains 131 genes, including 86 protein-coding genes, 8 ribosomal RNA genes, and 37 transfer RNA genes. The overall GC content of the whole genome is 36.3%. Phylogenetic analysis of 10 chloroplast genomes within the family Cannabaceae suggests that C. tetrandra clustered together with Celtis biondii in a unique clade. |
format | Online Article Text |
id | pubmed-7707362 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77073622020-12-22 The complete chloroplast genome sequence of Celtis tetrandra Wang, Yi Yuan, Xiaolong Zhang, Jinfeng Mitochondrial DNA B Resour Mitogenome Announcement The first complete chloroplast genome sequences of Celtis tetrandra were reported in this study. The cpDNA of C. tetrandra is 159,014 bp in length, contains a large single-copy region (LSC) of 86,097 bp, and a small single-copy region (SSC) of 19,129 bp, which were separated by a pair of inverted repeat (IR) regions of 26,894 bp. The genome contains 131 genes, including 86 protein-coding genes, 8 ribosomal RNA genes, and 37 transfer RNA genes. The overall GC content of the whole genome is 36.3%. Phylogenetic analysis of 10 chloroplast genomes within the family Cannabaceae suggests that C. tetrandra clustered together with Celtis biondii in a unique clade. Taylor & Francis 2019-10-11 /pmc/articles/PMC7707362/ /pubmed/33366040 http://dx.doi.org/10.1080/23802359.2019.1674705 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Wang, Yi Yuan, Xiaolong Zhang, Jinfeng The complete chloroplast genome sequence of Celtis tetrandra |
title | The complete chloroplast genome sequence of Celtis tetrandra |
title_full | The complete chloroplast genome sequence of Celtis tetrandra |
title_fullStr | The complete chloroplast genome sequence of Celtis tetrandra |
title_full_unstemmed | The complete chloroplast genome sequence of Celtis tetrandra |
title_short | The complete chloroplast genome sequence of Celtis tetrandra |
title_sort | complete chloroplast genome sequence of celtis tetrandra |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707362/ https://www.ncbi.nlm.nih.gov/pubmed/33366040 http://dx.doi.org/10.1080/23802359.2019.1674705 |
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