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Complete plastome of a subtropical tree Eriobotrya malipoensis (Rosaceae) in Yunnan
Eriobotrya malipoensis Kuan is an important wild woody evergreen tree within the genus Eriobotrya Lindl belonging the family Rosaceae. To better determine its phylogenetic location with respect to the other Eriobotrya species, the complete plastome of E. malipoensis was sequenced. The whole plastome...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707364/ https://www.ncbi.nlm.nih.gov/pubmed/33366073 http://dx.doi.org/10.1080/23802359.2019.1676680 |
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author | Qu, Shaohong Dong, Zhanghong Gao, Liyun Xu, Jian Sun, Zhenghai Xin, Peiyao |
author_facet | Qu, Shaohong Dong, Zhanghong Gao, Liyun Xu, Jian Sun, Zhenghai Xin, Peiyao |
author_sort | Qu, Shaohong |
collection | PubMed |
description | Eriobotrya malipoensis Kuan is an important wild woody evergreen tree within the genus Eriobotrya Lindl belonging the family Rosaceae. To better determine its phylogenetic location with respect to the other Eriobotrya species, the complete plastome of E. malipoensis was sequenced. The whole plastome is 159,313 bp in length, consisting of a pair of inverted repeat (IR) regions of 26,344 bp, one large single-copy (LSC) region of 87,270 bp, and one small single-copy (SSC) region of 19,355 bp. The overall G + C content of the whole plastome is 36.7%. Further, maximum likelihood phylogenetic analyse (TVM + F+R2 model) was conducted using 14 complete plastome of the Rosaceae. Our phylogeny supports the relationships: sisterhood of the E. malipoensis and E. fragrans Champ, flowed E. japonica Lindl. |
format | Online Article Text |
id | pubmed-7707364 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77073642020-12-22 Complete plastome of a subtropical tree Eriobotrya malipoensis (Rosaceae) in Yunnan Qu, Shaohong Dong, Zhanghong Gao, Liyun Xu, Jian Sun, Zhenghai Xin, Peiyao Mitochondrial DNA B Resour Mitogenome Announcement Eriobotrya malipoensis Kuan is an important wild woody evergreen tree within the genus Eriobotrya Lindl belonging the family Rosaceae. To better determine its phylogenetic location with respect to the other Eriobotrya species, the complete plastome of E. malipoensis was sequenced. The whole plastome is 159,313 bp in length, consisting of a pair of inverted repeat (IR) regions of 26,344 bp, one large single-copy (LSC) region of 87,270 bp, and one small single-copy (SSC) region of 19,355 bp. The overall G + C content of the whole plastome is 36.7%. Further, maximum likelihood phylogenetic analyse (TVM + F+R2 model) was conducted using 14 complete plastome of the Rosaceae. Our phylogeny supports the relationships: sisterhood of the E. malipoensis and E. fragrans Champ, flowed E. japonica Lindl. Taylor & Francis 2019-10-11 /pmc/articles/PMC7707364/ /pubmed/33366073 http://dx.doi.org/10.1080/23802359.2019.1676680 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Qu, Shaohong Dong, Zhanghong Gao, Liyun Xu, Jian Sun, Zhenghai Xin, Peiyao Complete plastome of a subtropical tree Eriobotrya malipoensis (Rosaceae) in Yunnan |
title | Complete plastome of a subtropical tree Eriobotrya malipoensis (Rosaceae) in Yunnan |
title_full | Complete plastome of a subtropical tree Eriobotrya malipoensis (Rosaceae) in Yunnan |
title_fullStr | Complete plastome of a subtropical tree Eriobotrya malipoensis (Rosaceae) in Yunnan |
title_full_unstemmed | Complete plastome of a subtropical tree Eriobotrya malipoensis (Rosaceae) in Yunnan |
title_short | Complete plastome of a subtropical tree Eriobotrya malipoensis (Rosaceae) in Yunnan |
title_sort | complete plastome of a subtropical tree eriobotrya malipoensis (rosaceae) in yunnan |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707364/ https://www.ncbi.nlm.nih.gov/pubmed/33366073 http://dx.doi.org/10.1080/23802359.2019.1676680 |
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