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Characterization of the complete chloroplast genome of a common Chinese medicinal herb, Eriocaulon buergerianum (Eriocaulaceae: Eriocaulon)
Eriocaulon buergerianum is a common Chinese medicinal herb and belongs to the family Eriocaulaceae genus Eriocaulon the annual herbs. In this study, the complete chloroplast genome of E. buergerianum was assembled and reported. The complete chloroplast genome of E. buergerianum is 157,016 bp in leng...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707373/ https://www.ncbi.nlm.nih.gov/pubmed/33366028 http://dx.doi.org/10.1080/23802359.2019.1673252 |
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author | Shan, Mingliang Cao, Tianyi Xing, Wenhao Guo, Chengwei |
author_facet | Shan, Mingliang Cao, Tianyi Xing, Wenhao Guo, Chengwei |
author_sort | Shan, Mingliang |
collection | PubMed |
description | Eriocaulon buergerianum is a common Chinese medicinal herb and belongs to the family Eriocaulaceae genus Eriocaulon the annual herbs. In this study, the complete chloroplast genome of E. buergerianum was assembled and reported. The complete chloroplast genome of E. buergerianum is 157,016 bp in length as the circular, which harbours a large single-copy region (LSC) of 81,534 bp, a small single-copy region (SSC) of 17,114 bp, and two inverted-repeat regions (IRs) of 26,393 bp each one. The overall nucleotide content of the chloroplast genome: A of 31.8%, T of 32.4%, C of 18.2% G of 17.6%, and 35.8% GC content. The chloroplast genome of E. buergerianum contains 133 genes, which includes 88 protein-coding genes (PCGs), 37 transfer RNA (tRNAs), and 8 ribosome RNA (rRNAs). The evolutionary analysis used neighbour-joining (NJ) method and the result showed that E. buergerianum was closely related to Eriocaulon sexangulare in the family Eriocaulaceae. This study will be helpful for genome data and genomic resources of the family Eriocaulaceae for further. |
format | Online Article Text |
id | pubmed-7707373 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77073732020-12-22 Characterization of the complete chloroplast genome of a common Chinese medicinal herb, Eriocaulon buergerianum (Eriocaulaceae: Eriocaulon) Shan, Mingliang Cao, Tianyi Xing, Wenhao Guo, Chengwei Mitochondrial DNA B Resour Mitogenome Announcement Eriocaulon buergerianum is a common Chinese medicinal herb and belongs to the family Eriocaulaceae genus Eriocaulon the annual herbs. In this study, the complete chloroplast genome of E. buergerianum was assembled and reported. The complete chloroplast genome of E. buergerianum is 157,016 bp in length as the circular, which harbours a large single-copy region (LSC) of 81,534 bp, a small single-copy region (SSC) of 17,114 bp, and two inverted-repeat regions (IRs) of 26,393 bp each one. The overall nucleotide content of the chloroplast genome: A of 31.8%, T of 32.4%, C of 18.2% G of 17.6%, and 35.8% GC content. The chloroplast genome of E. buergerianum contains 133 genes, which includes 88 protein-coding genes (PCGs), 37 transfer RNA (tRNAs), and 8 ribosome RNA (rRNAs). The evolutionary analysis used neighbour-joining (NJ) method and the result showed that E. buergerianum was closely related to Eriocaulon sexangulare in the family Eriocaulaceae. This study will be helpful for genome data and genomic resources of the family Eriocaulaceae for further. Taylor & Francis 2019-10-09 /pmc/articles/PMC7707373/ /pubmed/33366028 http://dx.doi.org/10.1080/23802359.2019.1673252 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Shan, Mingliang Cao, Tianyi Xing, Wenhao Guo, Chengwei Characterization of the complete chloroplast genome of a common Chinese medicinal herb, Eriocaulon buergerianum (Eriocaulaceae: Eriocaulon) |
title | Characterization of the complete chloroplast genome of a common Chinese medicinal herb, Eriocaulon buergerianum (Eriocaulaceae: Eriocaulon) |
title_full | Characterization of the complete chloroplast genome of a common Chinese medicinal herb, Eriocaulon buergerianum (Eriocaulaceae: Eriocaulon) |
title_fullStr | Characterization of the complete chloroplast genome of a common Chinese medicinal herb, Eriocaulon buergerianum (Eriocaulaceae: Eriocaulon) |
title_full_unstemmed | Characterization of the complete chloroplast genome of a common Chinese medicinal herb, Eriocaulon buergerianum (Eriocaulaceae: Eriocaulon) |
title_short | Characterization of the complete chloroplast genome of a common Chinese medicinal herb, Eriocaulon buergerianum (Eriocaulaceae: Eriocaulon) |
title_sort | characterization of the complete chloroplast genome of a common chinese medicinal herb, eriocaulon buergerianum (eriocaulaceae: eriocaulon) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707373/ https://www.ncbi.nlm.nih.gov/pubmed/33366028 http://dx.doi.org/10.1080/23802359.2019.1673252 |
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