The complete chloroplast genome sequence of Chimonanthus praecox cv. concolor

Calycanthaceae is a perennial shrub endemic to China with important ornamental and medicinal values. In this study, Chimonanthus praecox cv. concolor chloroplast (cp) genome was characterized using Illumina paired-end reads data. In total, whole cp genome is 153,254 bp long and contains a small sing...

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Autores principales: Zhao, Yujie, Ren, Yuan, Xu, Yunfang, Yan, Ming, Huo, Yan, Zhao, Xueqing, Yuan, Zhaohe
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707377/
https://www.ncbi.nlm.nih.gov/pubmed/33365934
http://dx.doi.org/10.1080/23802359.2019.1669084
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author Zhao, Yujie
Ren, Yuan
Xu, Yunfang
Yan, Ming
Huo, Yan
Zhao, Xueqing
Yuan, Zhaohe
author_facet Zhao, Yujie
Ren, Yuan
Xu, Yunfang
Yan, Ming
Huo, Yan
Zhao, Xueqing
Yuan, Zhaohe
author_sort Zhao, Yujie
collection PubMed
description Calycanthaceae is a perennial shrub endemic to China with important ornamental and medicinal values. In this study, Chimonanthus praecox cv. concolor chloroplast (cp) genome was characterized using Illumina paired-end reads data. In total, whole cp genome is 153,254 bp long and contains a small single-copy region of 19,769 bp, a pair of repeat (IRa and IRb) regions of 23,286 bp each, and a large single-copy region of 86,913 bp. This genome contains 129 genes, including 84 protein-genes, 8 rRNA genes, and 37 tRNA genes. Phylogenetic analysis based on 19 cp genomes showed that C. praecox cv. concolor is closely related to Chimonanthus praecox and Chimonanthus nitens.
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spelling pubmed-77073772020-12-22 The complete chloroplast genome sequence of Chimonanthus praecox cv. concolor Zhao, Yujie Ren, Yuan Xu, Yunfang Yan, Ming Huo, Yan Zhao, Xueqing Yuan, Zhaohe Mitochondrial DNA B Resour Mitogenome Announcement Calycanthaceae is a perennial shrub endemic to China with important ornamental and medicinal values. In this study, Chimonanthus praecox cv. concolor chloroplast (cp) genome was characterized using Illumina paired-end reads data. In total, whole cp genome is 153,254 bp long and contains a small single-copy region of 19,769 bp, a pair of repeat (IRa and IRb) regions of 23,286 bp each, and a large single-copy region of 86,913 bp. This genome contains 129 genes, including 84 protein-genes, 8 rRNA genes, and 37 tRNA genes. Phylogenetic analysis based on 19 cp genomes showed that C. praecox cv. concolor is closely related to Chimonanthus praecox and Chimonanthus nitens. Taylor & Francis 2019-09-24 /pmc/articles/PMC7707377/ /pubmed/33365934 http://dx.doi.org/10.1080/23802359.2019.1669084 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Zhao, Yujie
Ren, Yuan
Xu, Yunfang
Yan, Ming
Huo, Yan
Zhao, Xueqing
Yuan, Zhaohe
The complete chloroplast genome sequence of Chimonanthus praecox cv. concolor
title The complete chloroplast genome sequence of Chimonanthus praecox cv. concolor
title_full The complete chloroplast genome sequence of Chimonanthus praecox cv. concolor
title_fullStr The complete chloroplast genome sequence of Chimonanthus praecox cv. concolor
title_full_unstemmed The complete chloroplast genome sequence of Chimonanthus praecox cv. concolor
title_short The complete chloroplast genome sequence of Chimonanthus praecox cv. concolor
title_sort complete chloroplast genome sequence of chimonanthus praecox cv. concolor
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707377/
https://www.ncbi.nlm.nih.gov/pubmed/33365934
http://dx.doi.org/10.1080/23802359.2019.1669084
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