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The complete chloroplast genome of newly alien medicinal and toxic species, Zaleya pentandra (L.) C.Jeffrey (Aizoaceae), in China
The first complete chloroplast genome sequences of new intercepted alien weeds in China, pentandra (L.) C. Jeffrey, were reported in this study. The Z. pentandra plastome was 153,239 bp long, with the large single copy (LSC) region of 83,528 bp, the small single copy (SSC) region of 18,081 bp, and t...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2019
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707379/ https://www.ncbi.nlm.nih.gov/pubmed/33366017 http://dx.doi.org/10.1080/23802359.2019.1674709 |
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author | Xu, Han |
author_facet | Xu, Han |
author_sort | Xu, Han |
collection | PubMed |
description | The first complete chloroplast genome sequences of new intercepted alien weeds in China, pentandra (L.) C. Jeffrey, were reported in this study. The Z. pentandra plastome was 153,239 bp long, with the large single copy (LSC) region of 83,528 bp, the small single copy (SSC) region of 18,081 bp, and two inverted repeat (IR) regions of 25,815 bp. The plastome contained 130 genes, including 85 protein-coding, 8 ribosomal RNA, and 37 transfer RNA genes. The overall GC content was 37.0%. Phylogenetic analysis of 32 representative plastomes within the family Aizoaceae suggests that Zaleya is more closely related to Tetragonia than to Sesuvium which is different previous studies. However, due to the limited chloroplast genome accessions in Aizoaceae at present, the phylogenetic relationship between the subfamilies of the family cannot be further discussed. |
format | Online Article Text |
id | pubmed-7707379 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77073792020-12-22 The complete chloroplast genome of newly alien medicinal and toxic species, Zaleya pentandra (L.) C.Jeffrey (Aizoaceae), in China Xu, Han Mitochondrial DNA B Resour Mitogenome Announcement The first complete chloroplast genome sequences of new intercepted alien weeds in China, pentandra (L.) C. Jeffrey, were reported in this study. The Z. pentandra plastome was 153,239 bp long, with the large single copy (LSC) region of 83,528 bp, the small single copy (SSC) region of 18,081 bp, and two inverted repeat (IR) regions of 25,815 bp. The plastome contained 130 genes, including 85 protein-coding, 8 ribosomal RNA, and 37 transfer RNA genes. The overall GC content was 37.0%. Phylogenetic analysis of 32 representative plastomes within the family Aizoaceae suggests that Zaleya is more closely related to Tetragonia than to Sesuvium which is different previous studies. However, due to the limited chloroplast genome accessions in Aizoaceae at present, the phylogenetic relationship between the subfamilies of the family cannot be further discussed. Taylor & Francis 2019-10-07 /pmc/articles/PMC7707379/ /pubmed/33366017 http://dx.doi.org/10.1080/23802359.2019.1674709 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Xu, Han The complete chloroplast genome of newly alien medicinal and toxic species, Zaleya pentandra (L.) C.Jeffrey (Aizoaceae), in China |
title | The complete chloroplast genome of newly alien medicinal and toxic species, Zaleya pentandra (L.) C.Jeffrey (Aizoaceae), in China |
title_full | The complete chloroplast genome of newly alien medicinal and toxic species, Zaleya pentandra (L.) C.Jeffrey (Aizoaceae), in China |
title_fullStr | The complete chloroplast genome of newly alien medicinal and toxic species, Zaleya pentandra (L.) C.Jeffrey (Aizoaceae), in China |
title_full_unstemmed | The complete chloroplast genome of newly alien medicinal and toxic species, Zaleya pentandra (L.) C.Jeffrey (Aizoaceae), in China |
title_short | The complete chloroplast genome of newly alien medicinal and toxic species, Zaleya pentandra (L.) C.Jeffrey (Aizoaceae), in China |
title_sort | complete chloroplast genome of newly alien medicinal and toxic species, zaleya pentandra (l.) c.jeffrey (aizoaceae), in china |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707379/ https://www.ncbi.nlm.nih.gov/pubmed/33366017 http://dx.doi.org/10.1080/23802359.2019.1674709 |
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