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The complete chloroplast genome of Physochlaina physaloides (Solanaceae), an important medicinal plant
Physochlaina is an important perennial herbaceous genus with significant medicinal value, while the phylogeny of Physochlaina and tribe Hyoscyameae is not well resolved yet. In this study, we report the complete chloroplast genome sequences of Ph. physaloides, its complete chloroplast genome is 156,...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707380/ https://www.ncbi.nlm.nih.gov/pubmed/33366024 http://dx.doi.org/10.1080/23802359.2019.1674730 |
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author | Tong, Ling Zhu, Yi-Xuan Lei, Feng-Wei Shen, Xue-Li Mu, Xian-Yun |
author_facet | Tong, Ling Zhu, Yi-Xuan Lei, Feng-Wei Shen, Xue-Li Mu, Xian-Yun |
author_sort | Tong, Ling |
collection | PubMed |
description | Physochlaina is an important perennial herbaceous genus with significant medicinal value, while the phylogeny of Physochlaina and tribe Hyoscyameae is not well resolved yet. In this study, we report the complete chloroplast genome sequences of Ph. physaloides, its complete chloroplast genome is 156,413 bp in length, which is a typical quadripartite structure that includes a large single-copy region of 86,659 bp, a small single-copy region of 18,012 bp, and its GC content was 37.7%. A total of 132 genes were identified, including 87 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. Furthermore, a phylogenetic tree of the tribe Hyoscyameae was constructed based the complete chloroplast genome sequence, and a new topology of the tribe was obtained. This study provides valuable genetic information for the conservation and utilization of Ph. physaloides and also provide the potential for better understanding of the phylogeny of Hyoscyameae and Solanaceae. |
format | Online Article Text |
id | pubmed-7707380 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77073802020-12-22 The complete chloroplast genome of Physochlaina physaloides (Solanaceae), an important medicinal plant Tong, Ling Zhu, Yi-Xuan Lei, Feng-Wei Shen, Xue-Li Mu, Xian-Yun Mitochondrial DNA B Resour Mitogenome Announcement Physochlaina is an important perennial herbaceous genus with significant medicinal value, while the phylogeny of Physochlaina and tribe Hyoscyameae is not well resolved yet. In this study, we report the complete chloroplast genome sequences of Ph. physaloides, its complete chloroplast genome is 156,413 bp in length, which is a typical quadripartite structure that includes a large single-copy region of 86,659 bp, a small single-copy region of 18,012 bp, and its GC content was 37.7%. A total of 132 genes were identified, including 87 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. Furthermore, a phylogenetic tree of the tribe Hyoscyameae was constructed based the complete chloroplast genome sequence, and a new topology of the tribe was obtained. This study provides valuable genetic information for the conservation and utilization of Ph. physaloides and also provide the potential for better understanding of the phylogeny of Hyoscyameae and Solanaceae. Taylor & Francis 2019-10-09 /pmc/articles/PMC7707380/ /pubmed/33366024 http://dx.doi.org/10.1080/23802359.2019.1674730 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Tong, Ling Zhu, Yi-Xuan Lei, Feng-Wei Shen, Xue-Li Mu, Xian-Yun The complete chloroplast genome of Physochlaina physaloides (Solanaceae), an important medicinal plant |
title | The complete chloroplast genome of Physochlaina physaloides (Solanaceae), an important medicinal plant |
title_full | The complete chloroplast genome of Physochlaina physaloides (Solanaceae), an important medicinal plant |
title_fullStr | The complete chloroplast genome of Physochlaina physaloides (Solanaceae), an important medicinal plant |
title_full_unstemmed | The complete chloroplast genome of Physochlaina physaloides (Solanaceae), an important medicinal plant |
title_short | The complete chloroplast genome of Physochlaina physaloides (Solanaceae), an important medicinal plant |
title_sort | complete chloroplast genome of physochlaina physaloides (solanaceae), an important medicinal plant |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707380/ https://www.ncbi.nlm.nih.gov/pubmed/33366024 http://dx.doi.org/10.1080/23802359.2019.1674730 |
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