Characterization of the complete chloroplast genome of Sargassum fusiforme and its phylogenomic position within phaeophyceae

Sargassum fusiforme is an important economic seaweed in East Asia. In this study, we characterized the complete chloroplast genome sequence of S. fusiforme using PacBio long-read sequencing technology. It had a circular mapping molecular with the length of 124,286 bp, with a large single-copy region...

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Autores principales: Zhang, Yonghua, Wang, Shengqin, Qian, Weiguo, Shi, Yijian, Li, Nan, Yan, Xiufeng, Zou, Huixi, Wu, Mingjiang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707382/
https://www.ncbi.nlm.nih.gov/pubmed/33365945
http://dx.doi.org/10.1080/23802359.2019.1671246
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author Zhang, Yonghua
Wang, Shengqin
Qian, Weiguo
Shi, Yijian
Li, Nan
Yan, Xiufeng
Zou, Huixi
Wu, Mingjiang
author_facet Zhang, Yonghua
Wang, Shengqin
Qian, Weiguo
Shi, Yijian
Li, Nan
Yan, Xiufeng
Zou, Huixi
Wu, Mingjiang
author_sort Zhang, Yonghua
collection PubMed
description Sargassum fusiforme is an important economic seaweed in East Asia. In this study, we characterized the complete chloroplast genome sequence of S. fusiforme using PacBio long-read sequencing technology. It had a circular mapping molecular with the length of 124,286 bp, with a large single-copy region (LSC, 73,437 bp) and a small single copy region (SSC, 40,131 bp) separated by a pair of inverted repeats (IRs, 5,359 bp). The cp genome contained 173 genes including 139 protein-coding, 6 rRNA, and 28 tRNA genes. The phylogenomic analysis indicated that S. fusiforme is closely related to S. thunbergii.
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spelling pubmed-77073822020-12-22 Characterization of the complete chloroplast genome of Sargassum fusiforme and its phylogenomic position within phaeophyceae Zhang, Yonghua Wang, Shengqin Qian, Weiguo Shi, Yijian Li, Nan Yan, Xiufeng Zou, Huixi Wu, Mingjiang Mitochondrial DNA B Resour Mitogenome Announcement Sargassum fusiforme is an important economic seaweed in East Asia. In this study, we characterized the complete chloroplast genome sequence of S. fusiforme using PacBio long-read sequencing technology. It had a circular mapping molecular with the length of 124,286 bp, with a large single-copy region (LSC, 73,437 bp) and a small single copy region (SSC, 40,131 bp) separated by a pair of inverted repeats (IRs, 5,359 bp). The cp genome contained 173 genes including 139 protein-coding, 6 rRNA, and 28 tRNA genes. The phylogenomic analysis indicated that S. fusiforme is closely related to S. thunbergii. Taylor & Francis 2019-09-26 /pmc/articles/PMC7707382/ /pubmed/33365945 http://dx.doi.org/10.1080/23802359.2019.1671246 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Zhang, Yonghua
Wang, Shengqin
Qian, Weiguo
Shi, Yijian
Li, Nan
Yan, Xiufeng
Zou, Huixi
Wu, Mingjiang
Characterization of the complete chloroplast genome of Sargassum fusiforme and its phylogenomic position within phaeophyceae
title Characterization of the complete chloroplast genome of Sargassum fusiforme and its phylogenomic position within phaeophyceae
title_full Characterization of the complete chloroplast genome of Sargassum fusiforme and its phylogenomic position within phaeophyceae
title_fullStr Characterization of the complete chloroplast genome of Sargassum fusiforme and its phylogenomic position within phaeophyceae
title_full_unstemmed Characterization of the complete chloroplast genome of Sargassum fusiforme and its phylogenomic position within phaeophyceae
title_short Characterization of the complete chloroplast genome of Sargassum fusiforme and its phylogenomic position within phaeophyceae
title_sort characterization of the complete chloroplast genome of sargassum fusiforme and its phylogenomic position within phaeophyceae
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707382/
https://www.ncbi.nlm.nih.gov/pubmed/33365945
http://dx.doi.org/10.1080/23802359.2019.1671246
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