The complete chloroplast genome and phylogenetic analysis of Salix triandra from China

Salix triandra is a great willow for bees and an excellent choice for living willow structures. In this study, we assembled and annotated the complete chloroplast (cp) genome sequence of S. triandra. The whole cp genome is 155,821 base-pairs (bp) in size, which comprises one small single copy (SSC)...

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Autores principales: Wu, Dongyang, Wang, Yupeng, Zhang, Li, Dou, Lijun, Gao, Linming
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707385/
https://www.ncbi.nlm.nih.gov/pubmed/33366090
http://dx.doi.org/10.1080/23802359.2019.1674743
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author Wu, Dongyang
Wang, Yupeng
Zhang, Li
Dou, Lijun
Gao, Linming
author_facet Wu, Dongyang
Wang, Yupeng
Zhang, Li
Dou, Lijun
Gao, Linming
author_sort Wu, Dongyang
collection PubMed
description Salix triandra is a great willow for bees and an excellent choice for living willow structures. In this study, we assembled and annotated the complete chloroplast (cp) genome sequence of S. triandra. The whole cp genome is 155,821 base-pairs (bp) in size, which comprises one small single copy (SSC) region of 16,223 bp and one large single copy (LSC) region of 84,532 bp separated by a pair of inverted repeats (IRs) of 27,533 bp. There are 131 genes, including 86 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. Phylogenetic analysis with the Neighbour-joining method indicates that S. triandra is closely related to S. tetrasperma. The complete cp genome will facilitate the biological studies in the order Malpighiales in future.
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spelling pubmed-77073852020-12-22 The complete chloroplast genome and phylogenetic analysis of Salix triandra from China Wu, Dongyang Wang, Yupeng Zhang, Li Dou, Lijun Gao, Linming Mitochondrial DNA B Resour Mitogenome Announcement Salix triandra is a great willow for bees and an excellent choice for living willow structures. In this study, we assembled and annotated the complete chloroplast (cp) genome sequence of S. triandra. The whole cp genome is 155,821 base-pairs (bp) in size, which comprises one small single copy (SSC) region of 16,223 bp and one large single copy (LSC) region of 84,532 bp separated by a pair of inverted repeats (IRs) of 27,533 bp. There are 131 genes, including 86 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. Phylogenetic analysis with the Neighbour-joining method indicates that S. triandra is closely related to S. tetrasperma. The complete cp genome will facilitate the biological studies in the order Malpighiales in future. Taylor & Francis 2019-10-15 /pmc/articles/PMC7707385/ /pubmed/33366090 http://dx.doi.org/10.1080/23802359.2019.1674743 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Wu, Dongyang
Wang, Yupeng
Zhang, Li
Dou, Lijun
Gao, Linming
The complete chloroplast genome and phylogenetic analysis of Salix triandra from China
title The complete chloroplast genome and phylogenetic analysis of Salix triandra from China
title_full The complete chloroplast genome and phylogenetic analysis of Salix triandra from China
title_fullStr The complete chloroplast genome and phylogenetic analysis of Salix triandra from China
title_full_unstemmed The complete chloroplast genome and phylogenetic analysis of Salix triandra from China
title_short The complete chloroplast genome and phylogenetic analysis of Salix triandra from China
title_sort complete chloroplast genome and phylogenetic analysis of salix triandra from china
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707385/
https://www.ncbi.nlm.nih.gov/pubmed/33366090
http://dx.doi.org/10.1080/23802359.2019.1674743
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