Complete mitochondrial genome of Quercus variabilis (Fagales, Fagaceae)

Quercus variabilis (Chinese cork oak) is an economically valuable oak as the source of industrial cork, which was widely distributed in eastern Asia. In this study, the complete mitochondrial genome of Q. variabilis was sequenced using the Illumina Hiseq and PacBio Sequel technique. The mitogenome i...

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Autores principales: Bi, Quanxin, Li, Dongxing, Zhao, Yang, Wang, Mengke, Li, Yingchao, Liu, Xiaojuan, Wang, Libing, Yu, Haiyan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707397/
https://www.ncbi.nlm.nih.gov/pubmed/33366255
http://dx.doi.org/10.1080/23802359.2019.1687027
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author Bi, Quanxin
Li, Dongxing
Zhao, Yang
Wang, Mengke
Li, Yingchao
Liu, Xiaojuan
Wang, Libing
Yu, Haiyan
author_facet Bi, Quanxin
Li, Dongxing
Zhao, Yang
Wang, Mengke
Li, Yingchao
Liu, Xiaojuan
Wang, Libing
Yu, Haiyan
author_sort Bi, Quanxin
collection PubMed
description Quercus variabilis (Chinese cork oak) is an economically valuable oak as the source of industrial cork, which was widely distributed in eastern Asia. In this study, the complete mitochondrial genome of Q. variabilis was sequenced using the Illumina Hiseq and PacBio Sequel technique. The mitogenome is 412,886 bp in length and the GC content is 45.76%. The genome consists of 36 protein-coding genes, 3 ribosomal-RNA genes, and 21 transfer-RNA genes. Phylogenetic analysis based on protein-coding genes showed that Q. variabilis was close to the species in the Cucurbitaceae family.
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spelling pubmed-77073972020-12-22 Complete mitochondrial genome of Quercus variabilis (Fagales, Fagaceae) Bi, Quanxin Li, Dongxing Zhao, Yang Wang, Mengke Li, Yingchao Liu, Xiaojuan Wang, Libing Yu, Haiyan Mitochondrial DNA B Resour Mitogenome Announcement Quercus variabilis (Chinese cork oak) is an economically valuable oak as the source of industrial cork, which was widely distributed in eastern Asia. In this study, the complete mitochondrial genome of Q. variabilis was sequenced using the Illumina Hiseq and PacBio Sequel technique. The mitogenome is 412,886 bp in length and the GC content is 45.76%. The genome consists of 36 protein-coding genes, 3 ribosomal-RNA genes, and 21 transfer-RNA genes. Phylogenetic analysis based on protein-coding genes showed that Q. variabilis was close to the species in the Cucurbitaceae family. Taylor & Francis 2019-11-12 /pmc/articles/PMC7707397/ /pubmed/33366255 http://dx.doi.org/10.1080/23802359.2019.1687027 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Bi, Quanxin
Li, Dongxing
Zhao, Yang
Wang, Mengke
Li, Yingchao
Liu, Xiaojuan
Wang, Libing
Yu, Haiyan
Complete mitochondrial genome of Quercus variabilis (Fagales, Fagaceae)
title Complete mitochondrial genome of Quercus variabilis (Fagales, Fagaceae)
title_full Complete mitochondrial genome of Quercus variabilis (Fagales, Fagaceae)
title_fullStr Complete mitochondrial genome of Quercus variabilis (Fagales, Fagaceae)
title_full_unstemmed Complete mitochondrial genome of Quercus variabilis (Fagales, Fagaceae)
title_short Complete mitochondrial genome of Quercus variabilis (Fagales, Fagaceae)
title_sort complete mitochondrial genome of quercus variabilis (fagales, fagaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707397/
https://www.ncbi.nlm.nih.gov/pubmed/33366255
http://dx.doi.org/10.1080/23802359.2019.1687027
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