Complete chloroplast genome sequences of two Amomum species (Zingiberaceae)

Amomum tsao-ko and Amomum paratsaoko are well known medicinal and edible plants with a strong fragrance and flavour in China. Here, we have sequenced the two complete chloroplast genomes of Amomum tsao-ko and Amomum paratsaoko, which are 163,612 bp and 163,487 bp in length, respectively, and exhibit...

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Autores principales: Zhang, Ying-Min, Yang, Cong-Wei, Liu, Ying-Ying, Yang, Yao-Wen, Liu, Xiao-Li, Li, Guo-Dong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707409/
https://www.ncbi.nlm.nih.gov/pubmed/33366195
http://dx.doi.org/10.1080/23802359.2019.1682951
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author Zhang, Ying-Min
Yang, Cong-Wei
Liu, Ying-Ying
Yang, Yao-Wen
Liu, Xiao-Li
Li, Guo-Dong
author_facet Zhang, Ying-Min
Yang, Cong-Wei
Liu, Ying-Ying
Yang, Yao-Wen
Liu, Xiao-Li
Li, Guo-Dong
author_sort Zhang, Ying-Min
collection PubMed
description Amomum tsao-ko and Amomum paratsaoko are well known medicinal and edible plants with a strong fragrance and flavour in China. Here, we have sequenced the two complete chloroplast genomes of Amomum tsao-ko and Amomum paratsaoko, which are 163,612 bp and 163,487 bp in length, respectively, and exhibited LSC and SSC regions separated by a pair of inverted repeat regions. The cp genome of A. tsao-ko has 120 annotated genes, including 82 protein-coding genes, while A. paratsaoko has 121 annotated genes, including 83 protein-coding genes. Both cp genomes contained 30 tRNA genes and 8 rRNA genes. Phylogenetic analysis using a total chloroplast genome DNA sequence of 28 species revealed a close relationship between A. tsao-ko and A. paratsaoko with 100% bootstrap value.
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spelling pubmed-77074092020-12-22 Complete chloroplast genome sequences of two Amomum species (Zingiberaceae) Zhang, Ying-Min Yang, Cong-Wei Liu, Ying-Ying Yang, Yao-Wen Liu, Xiao-Li Li, Guo-Dong Mitochondrial DNA B Resour Mitogenome Announcement Amomum tsao-ko and Amomum paratsaoko are well known medicinal and edible plants with a strong fragrance and flavour in China. Here, we have sequenced the two complete chloroplast genomes of Amomum tsao-ko and Amomum paratsaoko, which are 163,612 bp and 163,487 bp in length, respectively, and exhibited LSC and SSC regions separated by a pair of inverted repeat regions. The cp genome of A. tsao-ko has 120 annotated genes, including 82 protein-coding genes, while A. paratsaoko has 121 annotated genes, including 83 protein-coding genes. Both cp genomes contained 30 tRNA genes and 8 rRNA genes. Phylogenetic analysis using a total chloroplast genome DNA sequence of 28 species revealed a close relationship between A. tsao-ko and A. paratsaoko with 100% bootstrap value. Taylor & Francis 2019-10-26 /pmc/articles/PMC7707409/ /pubmed/33366195 http://dx.doi.org/10.1080/23802359.2019.1682951 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Zhang, Ying-Min
Yang, Cong-Wei
Liu, Ying-Ying
Yang, Yao-Wen
Liu, Xiao-Li
Li, Guo-Dong
Complete chloroplast genome sequences of two Amomum species (Zingiberaceae)
title Complete chloroplast genome sequences of two Amomum species (Zingiberaceae)
title_full Complete chloroplast genome sequences of two Amomum species (Zingiberaceae)
title_fullStr Complete chloroplast genome sequences of two Amomum species (Zingiberaceae)
title_full_unstemmed Complete chloroplast genome sequences of two Amomum species (Zingiberaceae)
title_short Complete chloroplast genome sequences of two Amomum species (Zingiberaceae)
title_sort complete chloroplast genome sequences of two amomum species (zingiberaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707409/
https://www.ncbi.nlm.nih.gov/pubmed/33366195
http://dx.doi.org/10.1080/23802359.2019.1682951
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