The complete mitochondrial genome of Amur ide (Leuciscus waleckii waleckii)

In this study, the complete mitochondrial genome of Leuciscus waleckii waleckii was sequenced and got a whole length of 16605 bp. This genome was contain 2 rRNA, 22 tRNA, 13 protein-coding genes, 1 control region (D-loop) and 1 replication origin. And the nucleotide composition of this mitochondrial...

Descripción completa

Detalles Bibliográficos
Autores principales: Zhang, Huanqing, Xu, Dajie, Shi, Lupeng, Dou, Huashan, Sha, Weilai
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707412/
https://www.ncbi.nlm.nih.gov/pubmed/33366151
http://dx.doi.org/10.1080/23802359.2019.1679679
_version_ 1783617341772267520
author Zhang, Huanqing
Xu, Dajie
Shi, Lupeng
Dou, Huashan
Sha, Weilai
author_facet Zhang, Huanqing
Xu, Dajie
Shi, Lupeng
Dou, Huashan
Sha, Weilai
author_sort Zhang, Huanqing
collection PubMed
description In this study, the complete mitochondrial genome of Leuciscus waleckii waleckii was sequenced and got a whole length of 16605 bp. This genome was contain 2 rRNA, 22 tRNA, 13 protein-coding genes, 1 control region (D-loop) and 1 replication origin. And the nucleotide composition of this mitochondrial genome is 27.72% for A, 26.28% for T, 27.23% for C and 18.77% for G. To clarify the phylogenetic relationship of the Leuciscus waleckii waleckii, we concluded the phylogenetic tree using 12 PCGs (except ND6) of mitochondrial genome in Leuciscus waleckii waleckii and 16 other cyprinid fish by Bayesian inference (BI) methods and maximum-likelihood (ML). And the result show that Leuciscus waleckii waleckii was close to other Leuciscus species, especially Leuciscus baicalensis.
format Online
Article
Text
id pubmed-7707412
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-77074122020-12-22 The complete mitochondrial genome of Amur ide (Leuciscus waleckii waleckii) Zhang, Huanqing Xu, Dajie Shi, Lupeng Dou, Huashan Sha, Weilai Mitochondrial DNA B Resour Mitogenome Announcement In this study, the complete mitochondrial genome of Leuciscus waleckii waleckii was sequenced and got a whole length of 16605 bp. This genome was contain 2 rRNA, 22 tRNA, 13 protein-coding genes, 1 control region (D-loop) and 1 replication origin. And the nucleotide composition of this mitochondrial genome is 27.72% for A, 26.28% for T, 27.23% for C and 18.77% for G. To clarify the phylogenetic relationship of the Leuciscus waleckii waleckii, we concluded the phylogenetic tree using 12 PCGs (except ND6) of mitochondrial genome in Leuciscus waleckii waleckii and 16 other cyprinid fish by Bayesian inference (BI) methods and maximum-likelihood (ML). And the result show that Leuciscus waleckii waleckii was close to other Leuciscus species, especially Leuciscus baicalensis. Taylor & Francis 2019-10-21 /pmc/articles/PMC7707412/ /pubmed/33366151 http://dx.doi.org/10.1080/23802359.2019.1679679 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Zhang, Huanqing
Xu, Dajie
Shi, Lupeng
Dou, Huashan
Sha, Weilai
The complete mitochondrial genome of Amur ide (Leuciscus waleckii waleckii)
title The complete mitochondrial genome of Amur ide (Leuciscus waleckii waleckii)
title_full The complete mitochondrial genome of Amur ide (Leuciscus waleckii waleckii)
title_fullStr The complete mitochondrial genome of Amur ide (Leuciscus waleckii waleckii)
title_full_unstemmed The complete mitochondrial genome of Amur ide (Leuciscus waleckii waleckii)
title_short The complete mitochondrial genome of Amur ide (Leuciscus waleckii waleckii)
title_sort complete mitochondrial genome of amur ide (leuciscus waleckii waleckii)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707412/
https://www.ncbi.nlm.nih.gov/pubmed/33366151
http://dx.doi.org/10.1080/23802359.2019.1679679
work_keys_str_mv AT zhanghuanqing thecompletemitochondrialgenomeofamurideleuciscuswaleckiiwaleckii
AT xudajie thecompletemitochondrialgenomeofamurideleuciscuswaleckiiwaleckii
AT shilupeng thecompletemitochondrialgenomeofamurideleuciscuswaleckiiwaleckii
AT douhuashan thecompletemitochondrialgenomeofamurideleuciscuswaleckiiwaleckii
AT shaweilai thecompletemitochondrialgenomeofamurideleuciscuswaleckiiwaleckii
AT zhanghuanqing completemitochondrialgenomeofamurideleuciscuswaleckiiwaleckii
AT xudajie completemitochondrialgenomeofamurideleuciscuswaleckiiwaleckii
AT shilupeng completemitochondrialgenomeofamurideleuciscuswaleckiiwaleckii
AT douhuashan completemitochondrialgenomeofamurideleuciscuswaleckiiwaleckii
AT shaweilai completemitochondrialgenomeofamurideleuciscuswaleckiiwaleckii

Ejemplares similares