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Characterization of complete mitochondrial genome of seven-eleven crab Carpilius maculatus (Linnaeus, 1758)
In this study, we first determined and characterised the complete mitochondrial genome of seven-eleven crab Carpilius maculatus from South China Sea. The C. maculatus mitogenome is 15,761 bp long, and consists of 22 tRNA genes, two rRNA genes, 13 protein-coding genes (PCGs), and one control region....
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707418/ https://www.ncbi.nlm.nih.gov/pubmed/33366147 http://dx.doi.org/10.1080/23802359.2019.1679682 |
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author | Liu, Hongtao Yang, Mingqiu He, Yugui |
author_facet | Liu, Hongtao Yang, Mingqiu He, Yugui |
author_sort | Liu, Hongtao |
collection | PubMed |
description | In this study, we first determined and characterised the complete mitochondrial genome of seven-eleven crab Carpilius maculatus from South China Sea. The C. maculatus mitogenome is 15,761 bp long, and consists of 22 tRNA genes, two rRNA genes, 13 protein-coding genes (PCGs), and one control region. The nucleotide composition of C. maculatus mitogenome is significantly biased (A, G, T, and C was 35.9%, 9.8%, 35.5%, and 18.9%, respectively) with A + T contents of 71.3%. Three PCGs used an unusual initiation codon, and four PCGs were terminated with an uncomplete or abnormal stop codon. Six microsatellites were identified in C. maculatus mitogenome sequences. Phylogenetic tree showed that C. maculatus formed monophyletic clade with other Heterotremata species. |
format | Online Article Text |
id | pubmed-7707418 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77074182020-12-22 Characterization of complete mitochondrial genome of seven-eleven crab Carpilius maculatus (Linnaeus, 1758) Liu, Hongtao Yang, Mingqiu He, Yugui Mitochondrial DNA B Resour Mitogenome Announcement In this study, we first determined and characterised the complete mitochondrial genome of seven-eleven crab Carpilius maculatus from South China Sea. The C. maculatus mitogenome is 15,761 bp long, and consists of 22 tRNA genes, two rRNA genes, 13 protein-coding genes (PCGs), and one control region. The nucleotide composition of C. maculatus mitogenome is significantly biased (A, G, T, and C was 35.9%, 9.8%, 35.5%, and 18.9%, respectively) with A + T contents of 71.3%. Three PCGs used an unusual initiation codon, and four PCGs were terminated with an uncomplete or abnormal stop codon. Six microsatellites were identified in C. maculatus mitogenome sequences. Phylogenetic tree showed that C. maculatus formed monophyletic clade with other Heterotremata species. Taylor & Francis 2019-10-21 /pmc/articles/PMC7707418/ /pubmed/33366147 http://dx.doi.org/10.1080/23802359.2019.1679682 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Liu, Hongtao Yang, Mingqiu He, Yugui Characterization of complete mitochondrial genome of seven-eleven crab Carpilius maculatus (Linnaeus, 1758) |
title | Characterization of complete mitochondrial genome of seven-eleven crab Carpilius maculatus (Linnaeus, 1758) |
title_full | Characterization of complete mitochondrial genome of seven-eleven crab Carpilius maculatus (Linnaeus, 1758) |
title_fullStr | Characterization of complete mitochondrial genome of seven-eleven crab Carpilius maculatus (Linnaeus, 1758) |
title_full_unstemmed | Characterization of complete mitochondrial genome of seven-eleven crab Carpilius maculatus (Linnaeus, 1758) |
title_short | Characterization of complete mitochondrial genome of seven-eleven crab Carpilius maculatus (Linnaeus, 1758) |
title_sort | characterization of complete mitochondrial genome of seven-eleven crab carpilius maculatus (linnaeus, 1758) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707418/ https://www.ncbi.nlm.nih.gov/pubmed/33366147 http://dx.doi.org/10.1080/23802359.2019.1679682 |
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