The complete chloroplast genome sequence of Ludisia discolor from Hainan of China

Ludisia discolor is one of the most important ornamental and medicinal orchids. To improve our understanding of the evolution of chloroplast, we resequenced complete chloroplast (cp) genome of L. discolor from Hainan, China. The cp genome sequence of L. discolor of Hainan was 153,324 bp in length, w...

Descripción completa

Detalles Bibliográficos
Autores principales: Yu, Xia, Xie, Tai-Xiang, Liu, Bin, Zhang, Di-Yang, Liu, Xue-Die, Ai, Ye, Liu, Zhong-Jian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707421/
https://www.ncbi.nlm.nih.gov/pubmed/33366132
http://dx.doi.org/10.1080/23802359.2019.1678438
_version_ 1783617343941771264
author Yu, Xia
Xie, Tai-Xiang
Liu, Bin
Zhang, Di-Yang
Liu, Xue-Die
Ai, Ye
Liu, Zhong-Jian
author_facet Yu, Xia
Xie, Tai-Xiang
Liu, Bin
Zhang, Di-Yang
Liu, Xue-Die
Ai, Ye
Liu, Zhong-Jian
author_sort Yu, Xia
collection PubMed
description Ludisia discolor is one of the most important ornamental and medicinal orchids. To improve our understanding of the evolution of chloroplast, we resequenced complete chloroplast (cp) genome of L. discolor from Hainan, China. The cp genome sequence of L. discolor of Hainan was 153,324 bp in length, with a large single-copy (LSC) region of 82,922 bp, a small single-copy (SSC) region of 17,258 bp, and a pair of inverted repeats (IR) regions of 26,572 bp. Complete chloroplast genome contain 132 genes, there were 86 protein-coding genes, 38 tRNA genes and eight rRNA genes. The phylogenetic tree showed that L. discolor of Hainan is sister to L. discolor (unknown distributed region). Their cp genomes have same gene number but different in length of genome, indicating high conserved among them.
format Online
Article
Text
id pubmed-7707421
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-77074212020-12-22 The complete chloroplast genome sequence of Ludisia discolor from Hainan of China Yu, Xia Xie, Tai-Xiang Liu, Bin Zhang, Di-Yang Liu, Xue-Die Ai, Ye Liu, Zhong-Jian Mitochondrial DNA B Resour Mitogenome Announcement Ludisia discolor is one of the most important ornamental and medicinal orchids. To improve our understanding of the evolution of chloroplast, we resequenced complete chloroplast (cp) genome of L. discolor from Hainan, China. The cp genome sequence of L. discolor of Hainan was 153,324 bp in length, with a large single-copy (LSC) region of 82,922 bp, a small single-copy (SSC) region of 17,258 bp, and a pair of inverted repeats (IR) regions of 26,572 bp. Complete chloroplast genome contain 132 genes, there were 86 protein-coding genes, 38 tRNA genes and eight rRNA genes. The phylogenetic tree showed that L. discolor of Hainan is sister to L. discolor (unknown distributed region). Their cp genomes have same gene number but different in length of genome, indicating high conserved among them. Taylor & Francis 2019-10-18 /pmc/articles/PMC7707421/ /pubmed/33366132 http://dx.doi.org/10.1080/23802359.2019.1678438 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by-nc/4.0/
spellingShingle Mitogenome Announcement
Yu, Xia
Xie, Tai-Xiang
Liu, Bin
Zhang, Di-Yang
Liu, Xue-Die
Ai, Ye
Liu, Zhong-Jian
The complete chloroplast genome sequence of Ludisia discolor from Hainan of China
title The complete chloroplast genome sequence of Ludisia discolor from Hainan of China
title_full The complete chloroplast genome sequence of Ludisia discolor from Hainan of China
title_fullStr The complete chloroplast genome sequence of Ludisia discolor from Hainan of China
title_full_unstemmed The complete chloroplast genome sequence of Ludisia discolor from Hainan of China
title_short The complete chloroplast genome sequence of Ludisia discolor from Hainan of China
title_sort complete chloroplast genome sequence of ludisia discolor from hainan of china
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707421/
https://www.ncbi.nlm.nih.gov/pubmed/33366132
http://dx.doi.org/10.1080/23802359.2019.1678438
work_keys_str_mv AT yuxia thecompletechloroplastgenomesequenceofludisiadiscolorfromhainanofchina
AT xietaixiang thecompletechloroplastgenomesequenceofludisiadiscolorfromhainanofchina
AT liubin thecompletechloroplastgenomesequenceofludisiadiscolorfromhainanofchina
AT zhangdiyang thecompletechloroplastgenomesequenceofludisiadiscolorfromhainanofchina
AT liuxuedie thecompletechloroplastgenomesequenceofludisiadiscolorfromhainanofchina
AT aiye thecompletechloroplastgenomesequenceofludisiadiscolorfromhainanofchina
AT liuzhongjian thecompletechloroplastgenomesequenceofludisiadiscolorfromhainanofchina
AT yuxia completechloroplastgenomesequenceofludisiadiscolorfromhainanofchina
AT xietaixiang completechloroplastgenomesequenceofludisiadiscolorfromhainanofchina
AT liubin completechloroplastgenomesequenceofludisiadiscolorfromhainanofchina
AT zhangdiyang completechloroplastgenomesequenceofludisiadiscolorfromhainanofchina
AT liuxuedie completechloroplastgenomesequenceofludisiadiscolorfromhainanofchina
AT aiye completechloroplastgenomesequenceofludisiadiscolorfromhainanofchina
AT liuzhongjian completechloroplastgenomesequenceofludisiadiscolorfromhainanofchina

Ejemplares similares