The complete mitochondrial genome of an Atlantic Ocean Shortfin Mako Shark, Isurus oxyrinchus

We report the first complete mitochondrial genome of a shortfin mako shark from the Atlantic Ocean. The genome had 16,700 base pairs and contained 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes, and a non-coding D-loop. There were 81 individual differences compared to the published mitochondri...

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Detalles Bibliográficos
Autores principales: Gorman, Jonathan, Marra, Nicholas, Shivji, Mahmood S., Stanhope, Michael J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707436/
https://www.ncbi.nlm.nih.gov/pubmed/33366122
http://dx.doi.org/10.1080/23802359.2019.1677524
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author Gorman, Jonathan
Marra, Nicholas
Shivji, Mahmood S.
Stanhope, Michael J.
author_facet Gorman, Jonathan
Marra, Nicholas
Shivji, Mahmood S.
Stanhope, Michael J.
author_sort Gorman, Jonathan
collection PubMed
description We report the first complete mitochondrial genome of a shortfin mako shark from the Atlantic Ocean. The genome had 16,700 base pairs and contained 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes, and a non-coding D-loop. There were 81 individual differences compared to the published mitochondrial genome of a shortfin mako from the Pacific Ocean, with most variability found in protein coding genes, especially ND5, ND3, and ND1. These highly variable genes may be useful population markers in future studies, and availability of a second mitogenome will assist with future, genome-scale studies of this IUCN Endangered species.
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spelling pubmed-77074362020-12-22 The complete mitochondrial genome of an Atlantic Ocean Shortfin Mako Shark, Isurus oxyrinchus Gorman, Jonathan Marra, Nicholas Shivji, Mahmood S. Stanhope, Michael J. Mitochondrial DNA B Resour Mitogenome Announcement We report the first complete mitochondrial genome of a shortfin mako shark from the Atlantic Ocean. The genome had 16,700 base pairs and contained 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes, and a non-coding D-loop. There were 81 individual differences compared to the published mitochondrial genome of a shortfin mako from the Pacific Ocean, with most variability found in protein coding genes, especially ND5, ND3, and ND1. These highly variable genes may be useful population markers in future studies, and availability of a second mitogenome will assist with future, genome-scale studies of this IUCN Endangered species. Taylor & Francis 2019-10-18 /pmc/articles/PMC7707436/ /pubmed/33366122 http://dx.doi.org/10.1080/23802359.2019.1677524 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Gorman, Jonathan
Marra, Nicholas
Shivji, Mahmood S.
Stanhope, Michael J.
The complete mitochondrial genome of an Atlantic Ocean Shortfin Mako Shark, Isurus oxyrinchus
title The complete mitochondrial genome of an Atlantic Ocean Shortfin Mako Shark, Isurus oxyrinchus
title_full The complete mitochondrial genome of an Atlantic Ocean Shortfin Mako Shark, Isurus oxyrinchus
title_fullStr The complete mitochondrial genome of an Atlantic Ocean Shortfin Mako Shark, Isurus oxyrinchus
title_full_unstemmed The complete mitochondrial genome of an Atlantic Ocean Shortfin Mako Shark, Isurus oxyrinchus
title_short The complete mitochondrial genome of an Atlantic Ocean Shortfin Mako Shark, Isurus oxyrinchus
title_sort complete mitochondrial genome of an atlantic ocean shortfin mako shark, isurus oxyrinchus
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707436/
https://www.ncbi.nlm.nih.gov/pubmed/33366122
http://dx.doi.org/10.1080/23802359.2019.1677524
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