The complete chloroplast genome sequence of Kerria japonica (L.) DC. ‘pleniflora’ (Rosaceae)

Kerria japonica (L.) DC., a monotypic species endemic to China and Japan, is an important ornamental shrub. In this study, we reported the complete chloroplast genome sequence of K. japonica (L.) DC. ‘pleniflora’ (GenBank accession number: MN418902) to provide genomic resources for its conservation....

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Detalles Bibliográficos
Autores principales: Huo, Yan, Yan, Ming, Zhao, Xueqing, Zhu, Zunling, Yuan, Zhaohe
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707439/
https://www.ncbi.nlm.nih.gov/pubmed/33366160
http://dx.doi.org/10.1080/23802359.2019.1678433
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author Huo, Yan
Yan, Ming
Zhao, Xueqing
Zhu, Zunling
Yuan, Zhaohe
author_facet Huo, Yan
Yan, Ming
Zhao, Xueqing
Zhu, Zunling
Yuan, Zhaohe
author_sort Huo, Yan
collection PubMed
description Kerria japonica (L.) DC., a monotypic species endemic to China and Japan, is an important ornamental shrub. In this study, we reported the complete chloroplast genome sequence of K. japonica (L.) DC. ‘pleniflora’ (GenBank accession number: MN418902) to provide genomic resources for its conservation. The total chloroplast (cp) genome is 160,007 bp in length, including a large single-copy region (LSC) of 87,672 bp and a small single-copy region (SSC) of 19,461 bp, which are separated by two inverted repeat (IR) regions of 26,437 bp. The overall guanine-cytosine (GC) content of the genome sequence is 34.0%. The cp genome encodes 132 unique genes, including 84 protein-coding genes, 40 tRNA genes, and 8 rRNA genes. Phylogenetic analysis of 25 cp genomes showed that K. japonica ‘pleniflora’ was most closely related to K. japonica and then had a close genetic relationship with Neviusia cliftonii in Rosaceae.
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spelling pubmed-77074392020-12-22 The complete chloroplast genome sequence of Kerria japonica (L.) DC. ‘pleniflora’ (Rosaceae) Huo, Yan Yan, Ming Zhao, Xueqing Zhu, Zunling Yuan, Zhaohe Mitochondrial DNA B Resour Mitogenome Announcement Kerria japonica (L.) DC., a monotypic species endemic to China and Japan, is an important ornamental shrub. In this study, we reported the complete chloroplast genome sequence of K. japonica (L.) DC. ‘pleniflora’ (GenBank accession number: MN418902) to provide genomic resources for its conservation. The total chloroplast (cp) genome is 160,007 bp in length, including a large single-copy region (LSC) of 87,672 bp and a small single-copy region (SSC) of 19,461 bp, which are separated by two inverted repeat (IR) regions of 26,437 bp. The overall guanine-cytosine (GC) content of the genome sequence is 34.0%. The cp genome encodes 132 unique genes, including 84 protein-coding genes, 40 tRNA genes, and 8 rRNA genes. Phylogenetic analysis of 25 cp genomes showed that K. japonica ‘pleniflora’ was most closely related to K. japonica and then had a close genetic relationship with Neviusia cliftonii in Rosaceae. Taylor & Francis 2019-10-23 /pmc/articles/PMC7707439/ /pubmed/33366160 http://dx.doi.org/10.1080/23802359.2019.1678433 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Huo, Yan
Yan, Ming
Zhao, Xueqing
Zhu, Zunling
Yuan, Zhaohe
The complete chloroplast genome sequence of Kerria japonica (L.) DC. ‘pleniflora’ (Rosaceae)
title The complete chloroplast genome sequence of Kerria japonica (L.) DC. ‘pleniflora’ (Rosaceae)
title_full The complete chloroplast genome sequence of Kerria japonica (L.) DC. ‘pleniflora’ (Rosaceae)
title_fullStr The complete chloroplast genome sequence of Kerria japonica (L.) DC. ‘pleniflora’ (Rosaceae)
title_full_unstemmed The complete chloroplast genome sequence of Kerria japonica (L.) DC. ‘pleniflora’ (Rosaceae)
title_short The complete chloroplast genome sequence of Kerria japonica (L.) DC. ‘pleniflora’ (Rosaceae)
title_sort complete chloroplast genome sequence of kerria japonica (l.) dc. ‘pleniflora’ (rosaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707439/
https://www.ncbi.nlm.nih.gov/pubmed/33366160
http://dx.doi.org/10.1080/23802359.2019.1678433
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