The first complete chloroplast genome of Quercus coccinea (Scarlet Oak) and its phylogenetic position within Fagaceae

Quercus coccinea is a native to North America, which grows well in acidic soil and resists cold to extreme low temperature –40 °C. The chloroplast (cp) genome of Q. coccinea, sequenced based on next-generation platform (NEOSAT), is 161,298 bp in size. The cp genome encodes 133 genes, including 88 pr...

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Detalles Bibliográficos
Autores principales: Yang, Xuemei, Yin, Yanlei, Feng, Lijuan, Tang, Haixia, Wang, Fei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707449/
https://www.ncbi.nlm.nih.gov/pubmed/33366118
http://dx.doi.org/10.1080/23802359.2019.1677189
Descripción
Sumario:Quercus coccinea is a native to North America, which grows well in acidic soil and resists cold to extreme low temperature –40 °C. The chloroplast (cp) genome of Q. coccinea, sequenced based on next-generation platform (NEOSAT), is 161,298 bp in size. The cp genome encodes 133 genes, including 88 protein-coding genes (PCGs), 8 rRNA genes, and 37 tRNA genes. Phylogenetic relationship analysis based on complete cp genome sequences exhibited that both of Q. coccinea and Q. rubra were phylogenetically closer to Q. aliena var. Acutiserrata.

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