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The complete chloroplast genome of Impatiens uliginosa Franch., an endemic species in Southwest China

The complete chloroplast genome sequence of Impatiens uliginosa Franch., an endemic species in Southwest China, we research genetic and phylogenetic relationship with other species in an effort to provide genomic resources useful for promoting its conservation and utilization. The total chloroplast...

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Autores principales: Luo, Chao, Huang, Wulue, Zhu, Jiapeng, Feng, Zhixi, Liu, Yingli, Li, Yang, Li, Xinyi, Huang, Haiquan, Huang, Meijuan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707457/
https://www.ncbi.nlm.nih.gov/pubmed/33366215
http://dx.doi.org/10.1080/23802359.2019.1687024
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author Luo, Chao
Huang, Wulue
Zhu, Jiapeng
Feng, Zhixi
Liu, Yingli
Li, Yang
Li, Xinyi
Huang, Haiquan
Huang, Meijuan
author_facet Luo, Chao
Huang, Wulue
Zhu, Jiapeng
Feng, Zhixi
Liu, Yingli
Li, Yang
Li, Xinyi
Huang, Haiquan
Huang, Meijuan
author_sort Luo, Chao
collection PubMed
description The complete chloroplast genome sequence of Impatiens uliginosa Franch., an endemic species in Southwest China, we research genetic and phylogenetic relationship with other species in an effort to provide genomic resources useful for promoting its conservation and utilization. The total chloroplast genome size of I. uliginosa is 152,609 bp, with a typical quadripartite structure including a pair of inverted repeat (IRs, 25,871 bp) regions separated by a small single copy (SSC, 17,502 bp) region and a large single copy (LSC, 83,365 bp) region. The overall GC content of I. uliginosa plastid genome was 36.8%. The whole chloroplast genome contains 136 genes, including 89 protein-coding genes (PCGs), 38 transfer RNA genes (tRNAs), and 8 ribosomal RNA genes (rRNAs). Among these genes, 15 genes have one intron and 2 genes contain two introns. To investigate the evolution status, the phylogenetic tree based on APG III from 12 complete chloroplast plastomes of Ericales supports close relationships. According to the phylogenetic topologies, I. uliginosa was closely related to I. piufanensis.
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spelling pubmed-77074572020-12-22 The complete chloroplast genome of Impatiens uliginosa Franch., an endemic species in Southwest China Luo, Chao Huang, Wulue Zhu, Jiapeng Feng, Zhixi Liu, Yingli Li, Yang Li, Xinyi Huang, Haiquan Huang, Meijuan Mitochondrial DNA B Resour Mitogenome Announcement The complete chloroplast genome sequence of Impatiens uliginosa Franch., an endemic species in Southwest China, we research genetic and phylogenetic relationship with other species in an effort to provide genomic resources useful for promoting its conservation and utilization. The total chloroplast genome size of I. uliginosa is 152,609 bp, with a typical quadripartite structure including a pair of inverted repeat (IRs, 25,871 bp) regions separated by a small single copy (SSC, 17,502 bp) region and a large single copy (LSC, 83,365 bp) region. The overall GC content of I. uliginosa plastid genome was 36.8%. The whole chloroplast genome contains 136 genes, including 89 protein-coding genes (PCGs), 38 transfer RNA genes (tRNAs), and 8 ribosomal RNA genes (rRNAs). Among these genes, 15 genes have one intron and 2 genes contain two introns. To investigate the evolution status, the phylogenetic tree based on APG III from 12 complete chloroplast plastomes of Ericales supports close relationships. According to the phylogenetic topologies, I. uliginosa was closely related to I. piufanensis. Taylor & Francis 2019-11-06 /pmc/articles/PMC7707457/ /pubmed/33366215 http://dx.doi.org/10.1080/23802359.2019.1687024 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Luo, Chao
Huang, Wulue
Zhu, Jiapeng
Feng, Zhixi
Liu, Yingli
Li, Yang
Li, Xinyi
Huang, Haiquan
Huang, Meijuan
The complete chloroplast genome of Impatiens uliginosa Franch., an endemic species in Southwest China
title The complete chloroplast genome of Impatiens uliginosa Franch., an endemic species in Southwest China
title_full The complete chloroplast genome of Impatiens uliginosa Franch., an endemic species in Southwest China
title_fullStr The complete chloroplast genome of Impatiens uliginosa Franch., an endemic species in Southwest China
title_full_unstemmed The complete chloroplast genome of Impatiens uliginosa Franch., an endemic species in Southwest China
title_short The complete chloroplast genome of Impatiens uliginosa Franch., an endemic species in Southwest China
title_sort complete chloroplast genome of impatiens uliginosa franch., an endemic species in southwest china
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707457/
https://www.ncbi.nlm.nih.gov/pubmed/33366215
http://dx.doi.org/10.1080/23802359.2019.1687024
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