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The complete mitochondrial genome of ostorhinchus fleurieu (kurtiformes: Apogonidae) and phylogenetic studies of apogoninae
The complete mitochondrial genome of Ostorhinchus fleurieu was first determined, which was 16,521 bp in length, containing 13 protein-coding genes, two rRNA genes, 22 tRNA genes, a putative control region and one origin of replication on the light-strand. The overall base composition included C(29.2...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707501/ https://www.ncbi.nlm.nih.gov/pubmed/33366146 http://dx.doi.org/10.1080/23802359.2019.1679681 |
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author | Zhu, Kehua Gao, Yuanpei Yuan, Pengxiang Cao, Pinglin Ying, Xiaoguo Tao, Hengcong Liu, Bingjian |
author_facet | Zhu, Kehua Gao, Yuanpei Yuan, Pengxiang Cao, Pinglin Ying, Xiaoguo Tao, Hengcong Liu, Bingjian |
author_sort | Zhu, Kehua |
collection | PubMed |
description | The complete mitochondrial genome of Ostorhinchus fleurieu was first determined, which was 16,521 bp in length, containing 13 protein-coding genes, two rRNA genes, 22 tRNA genes, a putative control region and one origin of replication on the light-strand. The overall base composition included C(29.2%), A(26.7%), T(26.7%) and G(17.4%). Moreover, the 13 PCGs encoded 3800 amino acids in total, twelve of which used the initiation codon ATG except for COI started with GTG. Most of them ended with complete stop codon, whereas three protein-coding genes (COII, ND4 and Cytb) used incomplete stop codon and represented as T. The phylogenetic tree based on the Neighbour Joining method was constructed to provide relationship within Apogoninae, which could be a useful basis for management of this species. |
format | Online Article Text |
id | pubmed-7707501 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77075012020-12-22 The complete mitochondrial genome of ostorhinchus fleurieu (kurtiformes: Apogonidae) and phylogenetic studies of apogoninae Zhu, Kehua Gao, Yuanpei Yuan, Pengxiang Cao, Pinglin Ying, Xiaoguo Tao, Hengcong Liu, Bingjian Mitochondrial DNA B Resour Mitogenome Announcement The complete mitochondrial genome of Ostorhinchus fleurieu was first determined, which was 16,521 bp in length, containing 13 protein-coding genes, two rRNA genes, 22 tRNA genes, a putative control region and one origin of replication on the light-strand. The overall base composition included C(29.2%), A(26.7%), T(26.7%) and G(17.4%). Moreover, the 13 PCGs encoded 3800 amino acids in total, twelve of which used the initiation codon ATG except for COI started with GTG. Most of them ended with complete stop codon, whereas three protein-coding genes (COII, ND4 and Cytb) used incomplete stop codon and represented as T. The phylogenetic tree based on the Neighbour Joining method was constructed to provide relationship within Apogoninae, which could be a useful basis for management of this species. Taylor & Francis 2019-10-23 /pmc/articles/PMC7707501/ /pubmed/33366146 http://dx.doi.org/10.1080/23802359.2019.1679681 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Zhu, Kehua Gao, Yuanpei Yuan, Pengxiang Cao, Pinglin Ying, Xiaoguo Tao, Hengcong Liu, Bingjian The complete mitochondrial genome of ostorhinchus fleurieu (kurtiformes: Apogonidae) and phylogenetic studies of apogoninae |
title | The complete mitochondrial genome of ostorhinchus fleurieu (kurtiformes: Apogonidae) and phylogenetic studies of apogoninae |
title_full | The complete mitochondrial genome of ostorhinchus fleurieu (kurtiformes: Apogonidae) and phylogenetic studies of apogoninae |
title_fullStr | The complete mitochondrial genome of ostorhinchus fleurieu (kurtiformes: Apogonidae) and phylogenetic studies of apogoninae |
title_full_unstemmed | The complete mitochondrial genome of ostorhinchus fleurieu (kurtiformes: Apogonidae) and phylogenetic studies of apogoninae |
title_short | The complete mitochondrial genome of ostorhinchus fleurieu (kurtiformes: Apogonidae) and phylogenetic studies of apogoninae |
title_sort | complete mitochondrial genome of ostorhinchus fleurieu (kurtiformes: apogonidae) and phylogenetic studies of apogoninae |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707501/ https://www.ncbi.nlm.nih.gov/pubmed/33366146 http://dx.doi.org/10.1080/23802359.2019.1679681 |
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