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The complete mitochondrial genome of ostorhinchus fleurieu (kurtiformes: Apogonidae) and phylogenetic studies of apogoninae

The complete mitochondrial genome of Ostorhinchus fleurieu was first determined, which was 16,521 bp in length, containing 13 protein-coding genes, two rRNA genes, 22 tRNA genes, a putative control region and one origin of replication on the light-strand. The overall base composition included C(29.2...

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Autores principales: Zhu, Kehua, Gao, Yuanpei, Yuan, Pengxiang, Cao, Pinglin, Ying, Xiaoguo, Tao, Hengcong, Liu, Bingjian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707501/
https://www.ncbi.nlm.nih.gov/pubmed/33366146
http://dx.doi.org/10.1080/23802359.2019.1679681
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author Zhu, Kehua
Gao, Yuanpei
Yuan, Pengxiang
Cao, Pinglin
Ying, Xiaoguo
Tao, Hengcong
Liu, Bingjian
author_facet Zhu, Kehua
Gao, Yuanpei
Yuan, Pengxiang
Cao, Pinglin
Ying, Xiaoguo
Tao, Hengcong
Liu, Bingjian
author_sort Zhu, Kehua
collection PubMed
description The complete mitochondrial genome of Ostorhinchus fleurieu was first determined, which was 16,521 bp in length, containing 13 protein-coding genes, two rRNA genes, 22 tRNA genes, a putative control region and one origin of replication on the light-strand. The overall base composition included C(29.2%), A(26.7%), T(26.7%) and G(17.4%). Moreover, the 13 PCGs encoded 3800 amino acids in total, twelve of which used the initiation codon ATG except for COI started with GTG. Most of them ended with complete stop codon, whereas three protein-coding genes (COII, ND4 and Cytb) used incomplete stop codon and represented as T. The phylogenetic tree based on the Neighbour Joining method was constructed to provide relationship within Apogoninae, which could be a useful basis for management of this species.
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spelling pubmed-77075012020-12-22 The complete mitochondrial genome of ostorhinchus fleurieu (kurtiformes: Apogonidae) and phylogenetic studies of apogoninae Zhu, Kehua Gao, Yuanpei Yuan, Pengxiang Cao, Pinglin Ying, Xiaoguo Tao, Hengcong Liu, Bingjian Mitochondrial DNA B Resour Mitogenome Announcement The complete mitochondrial genome of Ostorhinchus fleurieu was first determined, which was 16,521 bp in length, containing 13 protein-coding genes, two rRNA genes, 22 tRNA genes, a putative control region and one origin of replication on the light-strand. The overall base composition included C(29.2%), A(26.7%), T(26.7%) and G(17.4%). Moreover, the 13 PCGs encoded 3800 amino acids in total, twelve of which used the initiation codon ATG except for COI started with GTG. Most of them ended with complete stop codon, whereas three protein-coding genes (COII, ND4 and Cytb) used incomplete stop codon and represented as T. The phylogenetic tree based on the Neighbour Joining method was constructed to provide relationship within Apogoninae, which could be a useful basis for management of this species. Taylor & Francis 2019-10-23 /pmc/articles/PMC7707501/ /pubmed/33366146 http://dx.doi.org/10.1080/23802359.2019.1679681 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Zhu, Kehua
Gao, Yuanpei
Yuan, Pengxiang
Cao, Pinglin
Ying, Xiaoguo
Tao, Hengcong
Liu, Bingjian
The complete mitochondrial genome of ostorhinchus fleurieu (kurtiformes: Apogonidae) and phylogenetic studies of apogoninae
title The complete mitochondrial genome of ostorhinchus fleurieu (kurtiformes: Apogonidae) and phylogenetic studies of apogoninae
title_full The complete mitochondrial genome of ostorhinchus fleurieu (kurtiformes: Apogonidae) and phylogenetic studies of apogoninae
title_fullStr The complete mitochondrial genome of ostorhinchus fleurieu (kurtiformes: Apogonidae) and phylogenetic studies of apogoninae
title_full_unstemmed The complete mitochondrial genome of ostorhinchus fleurieu (kurtiformes: Apogonidae) and phylogenetic studies of apogoninae
title_short The complete mitochondrial genome of ostorhinchus fleurieu (kurtiformes: Apogonidae) and phylogenetic studies of apogoninae
title_sort complete mitochondrial genome of ostorhinchus fleurieu (kurtiformes: apogonidae) and phylogenetic studies of apogoninae
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707501/
https://www.ncbi.nlm.nih.gov/pubmed/33366146
http://dx.doi.org/10.1080/23802359.2019.1679681
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